Protein–RNA interactions for Protein: A0AUP1

Ccdc112, Coiled-coil domain-containing protein 112, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc112A0AUP1 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ccdc112A0AUP1 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Ccdc112A0AUP1 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Ccdc112A0AUP1 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ccdc112A0AUP1 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Ccdc112A0AUP1 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ccdc112A0AUP1 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ccdc112A0AUP1 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC15□□□□□ -0.01
Ccdc112A0AUP1 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC15□□□□□ -0.01
Ccdc112A0AUP1 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Ccdc112A0AUP1 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC15□□□□□ -0.01
Ccdc112A0AUP1 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ccdc112A0AUP1 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC15□□□□□ -0.01
Ccdc112A0AUP1 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Ccdc112A0AUP1 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC15□□□□□ -0.01
Ccdc112A0AUP1 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC15□□□□□ -0.01
Ccdc112A0AUP1 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC15□□□□□ -0.01
Ccdc112A0AUP1 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC15□□□□□ -0.01
Ccdc112A0AUP1 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC15□□□□□ -0.01
Ccdc112A0AUP1 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC15□□□□□ -0.01
Ccdc112A0AUP1 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
Ccdc112A0AUP1 Gm31326-201ENSMUST00000191856 1048 ntBASIC15□□□□□ -0.01
Ccdc112A0AUP1 AC093022.5-201ENSMUST00000226841 1079 ntBASIC15□□□□□ -0.01
Ccdc112A0AUP1 AC154276.1-201ENSMUST00000228874 1299 ntBASIC15□□□□□ -0.01
Ccdc112A0AUP1 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC15□□□□□ -0.01
Ccdc112A0AUP1 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Ccdc112A0AUP1 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ccdc112A0AUP1 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Ccdc112A0AUP1 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC15□□□□□ -0.01
Ccdc112A0AUP1 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ccdc112A0AUP1 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Ccdc112A0AUP1 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Ccdc112A0AUP1 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ccdc112A0AUP1 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Ccdc112A0AUP1 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC15□□□□□ -0.01
Ccdc112A0AUP1 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Ccdc112A0AUP1 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ccdc112A0AUP1 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Ccdc112A0AUP1 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Ccdc112A0AUP1 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Ccdc112A0AUP1 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC14.99□□□□□ -0.01
Ccdc112A0AUP1 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC14.99□□□□□ -0.01
Ccdc112A0AUP1 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC14.99□□□□□ -0.01
Ccdc112A0AUP1 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ccdc112A0AUP1 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC14.99□□□□□ -0.01
Ccdc112A0AUP1 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ccdc112A0AUP1 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ccdc112A0AUP1 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Ccdc112A0AUP1 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Ccdc112A0AUP1 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ccdc112A0AUP1 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ccdc112A0AUP1 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Ccdc112A0AUP1 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ccdc112A0AUP1 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
Ccdc112A0AUP1 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Ccdc112A0AUP1 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC14.99□□□□□ -0.01
Ccdc112A0AUP1 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC14.99□□□□□ -0.01
Ccdc112A0AUP1 Gm5354-201ENSMUST00000182417 973 ntBASIC14.99□□□□□ -0.01
Ccdc112A0AUP1 Gm45195-201ENSMUST00000205597 1008 ntBASIC14.99□□□□□ -0.01
Ccdc112A0AUP1 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ccdc112A0AUP1 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ccdc112A0AUP1 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ccdc112A0AUP1 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ccdc112A0AUP1 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ccdc112A0AUP1 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC14.99□□□□□ -0.01
Ccdc112A0AUP1 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ccdc112A0AUP1 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ccdc112A0AUP1 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ccdc112A0AUP1 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Ccdc112A0AUP1 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Ccdc112A0AUP1 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ccdc112A0AUP1 Rnf17-202ENSMUST00000223627 2077 ntBASIC14.99□□□□□ -0.01
Ccdc112A0AUP1 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ccdc112A0AUP1 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ccdc112A0AUP1 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ccdc112A0AUP1 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ccdc112A0AUP1 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
Ccdc112A0AUP1 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ccdc112A0AUP1 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ccdc112A0AUP1 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ccdc112A0AUP1 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Ccdc112A0AUP1 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC14.98□□□□□ -0.01
Ccdc112A0AUP1 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ccdc112A0AUP1 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ccdc112A0AUP1 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ccdc112A0AUP1 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ccdc112A0AUP1 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ccdc112A0AUP1 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Ccdc112A0AUP1 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Ccdc112A0AUP1 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ccdc112A0AUP1 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ccdc112A0AUP1 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ccdc112A0AUP1 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ccdc112A0AUP1 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ccdc112A0AUP1 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC14.98□□□□□ -0.01
Ccdc112A0AUP1 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Ccdc112A0AUP1 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Ccdc112A0AUP1 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ccdc112A0AUP1 Gm3052-202ENSMUST00000188254 2224 ntBASIC14.98□□□□□ -0.01
Ccdc112A0AUP1 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 81.8 ms