Protein–RNA interactions for Protein: A0A140LIT1

Ccdc194, Coiled-coil domain-containing protein 194, mousemouse

Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc194A0A140LIT1 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Ccdc194A0A140LIT1 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC13.08□□□□□ -0.31
Ccdc194A0A140LIT1 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.31
Ccdc194A0A140LIT1 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Ccdc194A0A140LIT1 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ccdc194A0A140LIT1 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ccdc194A0A140LIT1 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Ccdc194A0A140LIT1 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Ccdc194A0A140LIT1 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Ccdc194A0A140LIT1 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Ccdc194A0A140LIT1 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ccdc194A0A140LIT1 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Ccdc194A0A140LIT1 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC13.08□□□□□ -0.32
Ccdc194A0A140LIT1 Gm15920-201ENSMUST00000118998 402 ntBASIC13.08□□□□□ -0.32
Ccdc194A0A140LIT1 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
Ccdc194A0A140LIT1 Gm6161-201ENSMUST00000121942 1102 ntBASIC13.08□□□□□ -0.32
Ccdc194A0A140LIT1 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.32
Ccdc194A0A140LIT1 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ccdc194A0A140LIT1 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Ccdc194A0A140LIT1 Gm6254-201ENSMUST00000168178 1072 ntBASIC13.08□□□□□ -0.32
Ccdc194A0A140LIT1 Gm6153-201ENSMUST00000172004 1058 ntBASIC13.08□□□□□ -0.32
Ccdc194A0A140LIT1 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Ccdc194A0A140LIT1 Gm29608-201ENSMUST00000190444 463 ntBASIC13.08□□□□□ -0.32
Ccdc194A0A140LIT1 Gm5641-202ENSMUST00000198699 1080 ntBASIC13.08□□□□□ -0.32
Ccdc194A0A140LIT1 Gm42550-201ENSMUST00000201553 960 ntBASIC13.08□□□□□ -0.32
Ccdc194A0A140LIT1 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Ccdc194A0A140LIT1 AC073947.2-201ENSMUST00000215888 1130 ntBASIC13.08□□□□□ -0.32
Ccdc194A0A140LIT1 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ccdc194A0A140LIT1 CT573086.1-201ENSMUST00000227202 1074 ntBASIC13.08□□□□□ -0.32
Ccdc194A0A140LIT1 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ccdc194A0A140LIT1 Gm5867-201ENSMUST00000063197 592 ntBASIC13.08□□□□□ -0.32
Ccdc194A0A140LIT1 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ccdc194A0A140LIT1 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ccdc194A0A140LIT1 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC13.08□□□□□ -0.32
Ccdc194A0A140LIT1 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ccdc194A0A140LIT1 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ccdc194A0A140LIT1 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Ccdc194A0A140LIT1 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Ccdc194A0A140LIT1 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ccdc194A0A140LIT1 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Ccdc194A0A140LIT1 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Ccdc194A0A140LIT1 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC13.08□□□□□ -0.32
Ccdc194A0A140LIT1 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ccdc194A0A140LIT1 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Ccdc194A0A140LIT1 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ccdc194A0A140LIT1 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ccdc194A0A140LIT1 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ccdc194A0A140LIT1 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ccdc194A0A140LIT1 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Ccdc194A0A140LIT1 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ccdc194A0A140LIT1 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC13.07□□□□□ -0.32
Ccdc194A0A140LIT1 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC13.07□□□□□ -0.32
Ccdc194A0A140LIT1 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ccdc194A0A140LIT1 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ccdc194A0A140LIT1 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ccdc194A0A140LIT1 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ccdc194A0A140LIT1 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Ccdc194A0A140LIT1 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ccdc194A0A140LIT1 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC13.07□□□□□ -0.32
Ccdc194A0A140LIT1 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ccdc194A0A140LIT1 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ccdc194A0A140LIT1 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ccdc194A0A140LIT1 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Ccdc194A0A140LIT1 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ccdc194A0A140LIT1 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ccdc194A0A140LIT1 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC13.07□□□□□ -0.32
Ccdc194A0A140LIT1 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC13.07□□□□□ -0.32
Ccdc194A0A140LIT1 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC13.07□□□□□ -0.32
Ccdc194A0A140LIT1 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Ccdc194A0A140LIT1 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ccdc194A0A140LIT1 Gm31326-201ENSMUST00000191856 1048 ntBASIC13.07□□□□□ -0.32
Ccdc194A0A140LIT1 Gm44985-201ENSMUST00000206202 1016 ntBASIC13.07□□□□□ -0.32
Ccdc194A0A140LIT1 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ccdc194A0A140LIT1 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Ccdc194A0A140LIT1 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Ccdc194A0A140LIT1 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Ccdc194A0A140LIT1 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ccdc194A0A140LIT1 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ccdc194A0A140LIT1 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Ccdc194A0A140LIT1 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ccdc194A0A140LIT1 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ccdc194A0A140LIT1 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ccdc194A0A140LIT1 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ccdc194A0A140LIT1 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC13.07□□□□□ -0.32
Ccdc194A0A140LIT1 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Ccdc194A0A140LIT1 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ccdc194A0A140LIT1 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ccdc194A0A140LIT1 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ccdc194A0A140LIT1 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ccdc194A0A140LIT1 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Ccdc194A0A140LIT1 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Ccdc194A0A140LIT1 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Ccdc194A0A140LIT1 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Ccdc194A0A140LIT1 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ccdc194A0A140LIT1 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ccdc194A0A140LIT1 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ccdc194A0A140LIT1 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC13.06□□□□□ -0.32
Ccdc194A0A140LIT1 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Ccdc194A0A140LIT1 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Ccdc194A0A140LIT1 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 67.1 ms