Protein–RNA interactions for Protein: A0A0G2LB96

Trbv29, T cell receptor beta, variable 29 (Fragment), mousemouse

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv29A0A0G2LB96 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trbv29A0A0G2LB96 AC134335.2-201ENSMUST00000227660 440 ntBASIC10.91□□□□□ -0.66
Trbv29A0A0G2LB96 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trbv29A0A0G2LB96 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trbv29A0A0G2LB96 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trbv29A0A0G2LB96 AC164107.1-201ENSMUST00000227730 2161 ntBASIC10.91□□□□□ -0.66
Trbv29A0A0G2LB96 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC10.91□□□□□ -0.66
Trbv29A0A0G2LB96 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trbv29A0A0G2LB96 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trbv29A0A0G2LB96 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trbv29A0A0G2LB96 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Trbv29A0A0G2LB96 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trbv29A0A0G2LB96 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Trbv29A0A0G2LB96 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Trbv29A0A0G2LB96 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC10.9□□□□□ -0.66
Trbv29A0A0G2LB96 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC10.9□□□□□ -0.66
Trbv29A0A0G2LB96 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC10.9□□□□□ -0.66
Trbv29A0A0G2LB96 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
Trbv29A0A0G2LB96 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Trbv29A0A0G2LB96 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trbv29A0A0G2LB96 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Trbv29A0A0G2LB96 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Trbv29A0A0G2LB96 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trbv29A0A0G2LB96 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trbv29A0A0G2LB96 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC10.9□□□□□ -0.66
Trbv29A0A0G2LB96 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Trbv29A0A0G2LB96 Gm20554-201ENSMUST00000177421 2352 ntBASIC10.9□□□□□ -0.66
Trbv29A0A0G2LB96 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trbv29A0A0G2LB96 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trbv29A0A0G2LB96 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trbv29A0A0G2LB96 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trbv29A0A0G2LB96 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trbv29A0A0G2LB96 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trbv29A0A0G2LB96 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trbv29A0A0G2LB96 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC10.9□□□□□ -0.66
Trbv29A0A0G2LB96 Gm18263-201ENSMUST00000220846 1928 ntBASIC10.9□□□□□ -0.66
Trbv29A0A0G2LB96 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trbv29A0A0G2LB96 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trbv29A0A0G2LB96 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trbv29A0A0G2LB96 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Trbv29A0A0G2LB96 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trbv29A0A0G2LB96 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trbv29A0A0G2LB96 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC10.9□□□□□ -0.66
Trbv29A0A0G2LB96 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC10.9□□□□□ -0.66
Trbv29A0A0G2LB96 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC10.9□□□□□ -0.66
Trbv29A0A0G2LB96 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trbv29A0A0G2LB96 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC10.9□□□□□ -0.66
Trbv29A0A0G2LB96 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trbv29A0A0G2LB96 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC10.9□□□□□ -0.66
Trbv29A0A0G2LB96 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trbv29A0A0G2LB96 AC238811.1-201ENSMUST00000225302 441 ntBASIC10.9□□□□□ -0.66
Trbv29A0A0G2LB96 AC138604.1-201ENSMUST00000226969 739 ntBASIC10.9□□□□□ -0.66
Trbv29A0A0G2LB96 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trbv29A0A0G2LB96 Gm3052-202ENSMUST00000188254 2224 ntBASIC10.9□□□□□ -0.66
Trbv29A0A0G2LB96 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC10.9□□□□□ -0.66
Trbv29A0A0G2LB96 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trbv29A0A0G2LB96 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Trbv29A0A0G2LB96 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
Trbv29A0A0G2LB96 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
Trbv29A0A0G2LB96 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC10.9□□□□□ -0.66
Trbv29A0A0G2LB96 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trbv29A0A0G2LB96 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
Trbv29A0A0G2LB96 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.67
Trbv29A0A0G2LB96 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Trbv29A0A0G2LB96 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Trbv29A0A0G2LB96 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Trbv29A0A0G2LB96 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.67
Trbv29A0A0G2LB96 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.67
Trbv29A0A0G2LB96 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Trbv29A0A0G2LB96 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC10.9□□□□□ -0.67
Trbv29A0A0G2LB96 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trbv29A0A0G2LB96 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trbv29A0A0G2LB96 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trbv29A0A0G2LB96 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Trbv29A0A0G2LB96 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trbv29A0A0G2LB96 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trbv29A0A0G2LB96 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
Trbv29A0A0G2LB96 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC10.89□□□□□ -0.67
Trbv29A0A0G2LB96 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC10.89□□□□□ -0.67
Trbv29A0A0G2LB96 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trbv29A0A0G2LB96 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trbv29A0A0G2LB96 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trbv29A0A0G2LB96 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Trbv29A0A0G2LB96 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trbv29A0A0G2LB96 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Trbv29A0A0G2LB96 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trbv29A0A0G2LB96 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trbv29A0A0G2LB96 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trbv29A0A0G2LB96 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
Trbv29A0A0G2LB96 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Trbv29A0A0G2LB96 Gm14701-201ENSMUST00000117156 348 ntBASIC10.89□□□□□ -0.67
Trbv29A0A0G2LB96 Gm26308-201ENSMUST00000157768 69 ntBASIC10.89□□□□□ -0.67
Trbv29A0A0G2LB96 Gm6736-201ENSMUST00000166583 948 ntBASIC10.89□□□□□ -0.67
Trbv29A0A0G2LB96 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
Trbv29A0A0G2LB96 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC10.89□□□□□ -0.67
Trbv29A0A0G2LB96 Gm43094-201ENSMUST00000196549 921 ntBASIC10.89□□□□□ -0.67
Trbv29A0A0G2LB96 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC10.89□□□□□ -0.67
Trbv29A0A0G2LB96 AC165157.4-201ENSMUST00000220587 139 ntBASIC10.89□□□□□ -0.67
Trbv29A0A0G2LB96 AC154276.1-201ENSMUST00000228874 1299 ntBASIC10.89□□□□□ -0.67
Trbv29A0A0G2LB96 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 45.3 ms