Protein–RNA interactions for Protein: A0A0G2JEM0

Trav3n-3, T cell receptor alpha variable 3D-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3n-3A0A0G2JEM0 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Fn3krp-201ENSMUST00000038096 2520 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Gm3716-202ENSMUST00000198582 2879 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC9.95□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC9.95□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC9.95□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Gm29741-201ENSMUST00000192667 421 ntBASIC9.95□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Gm5364-201ENSMUST00000216789 889 ntBASIC9.95□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC9.95□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC9.95□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Gm45751-201ENSMUST00000210185 1573 ntBASIC9.95□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trav3n-3A0A0G2JEM0 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC9.95□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC9.95□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC9.95□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC9.95□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Vmn2r-ps25-201ENSMUST00000202322 2321 ntBASIC9.95□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Adra1a-206ENSMUST00000225182 2337 ntBASIC9.95□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC9.95□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Cyb561d1-203ENSMUST00000106655 4275 ntAPPRIS P4 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Zmiz1-208ENSMUST00000162645 7482 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Gm37324-201ENSMUST00000194500 4504 ntBASIC9.94□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Clvs2-204ENSMUST00000161692 4283 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Klhl29-202ENSMUST00000218384 2716 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC9.94□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Gm15987-201ENSMUST00000141700 2231 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Trav3n-3A0A0G2JEM0 AC122314.1-201ENSMUST00000223056 2239 ntBASIC9.94□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC9.94□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Plekhn1-202ENSMUST00000105571 2004 ntTSL 5 BASIC9.94□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC9.94□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC9.94□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Gm13823-201ENSMUST00000119930 345 ntBASIC9.94□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC9.94□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC9.94□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Gm20553-201ENSMUST00000204205 844 ntBASIC9.94□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Gm18049-201ENSMUST00000208909 581 ntBASIC9.94□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC9.94□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Trav3n-3A0A0G2JEM0 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC9.94□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Gm5628-201ENSMUST00000222318 1049 ntBASIC9.94□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Mirg-208ENSMUST00000182499 3187 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Gm34425-201ENSMUST00000216269 3079 ntTSL 5 BASIC9.94□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Adgre5-208ENSMUST00000166939 2980 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Adgre5-201ENSMUST00000002964 2986 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Trav3n-3A0A0G2JEM0 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Gm1995-201ENSMUST00000220838 2602 ntBASIC9.94□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Pafah2-201ENSMUST00000105869 2248 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Gpr17-201ENSMUST00000064016 5195 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Trav3n-3A0A0G2JEM0 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Pnpla6-212ENSMUST00000208002 4444 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 66 ms