Protein–RNA interactions for Protein: S4R2K0

Pdf, Peptide deformylase, mousemouse

Predictions only

Length 231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdfS4R2K0 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
PdfS4R2K0 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC10.1□□□□□ -0.79
PdfS4R2K0 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC10.1□□□□□ -0.79
PdfS4R2K0 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
PdfS4R2K0 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
PdfS4R2K0 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
PdfS4R2K0 Sgk1-213ENSMUST00000164659 2602 ntTSL 5 BASIC10.1□□□□□ -0.79
PdfS4R2K0 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
PdfS4R2K0 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
PdfS4R2K0 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
PdfS4R2K0 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC10.1□□□□□ -0.79
PdfS4R2K0 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC10.1□□□□□ -0.79
PdfS4R2K0 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC10.09□□□□□ -0.79
PdfS4R2K0 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC10.09□□□□□ -0.79
PdfS4R2K0 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
PdfS4R2K0 Gm8775-201ENSMUST00000170943 1327 ntBASIC10.09□□□□□ -0.79
PdfS4R2K0 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC10.09□□□□□ -0.79
PdfS4R2K0 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
PdfS4R2K0 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC10.09□□□□□ -0.79
PdfS4R2K0 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC10.09□□□□□ -0.79
PdfS4R2K0 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
PdfS4R2K0 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
PdfS4R2K0 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC10.09□□□□□ -0.79
PdfS4R2K0 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC10.09□□□□□ -0.79
PdfS4R2K0 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
PdfS4R2K0 Cds2-201ENSMUST00000089461 8073 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
PdfS4R2K0 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
PdfS4R2K0 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC10.09□□□□□ -0.79
PdfS4R2K0 Gm45242-201ENSMUST00000210666 2129 ntBASIC10.09□□□□□ -0.79
PdfS4R2K0 Banp-204ENSMUST00000170857 5444 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
PdfS4R2K0 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC10.09□□□□□ -0.79
PdfS4R2K0 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC10.09□□□□□ -0.79
PdfS4R2K0 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
PdfS4R2K0 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
PdfS4R2K0 Rsl1-201ENSMUST00000021997 2591 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
PdfS4R2K0 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
PdfS4R2K0 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
PdfS4R2K0 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
PdfS4R2K0 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC10.09□□□□□ -0.79
PdfS4R2K0 AC154725.1-201ENSMUST00000224826 1961 ntBASIC10.09□□□□□ -0.79
PdfS4R2K0 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
PdfS4R2K0 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
PdfS4R2K0 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC10.09□□□□□ -0.79
PdfS4R2K0 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC10.09□□□□□ -0.79
PdfS4R2K0 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
PdfS4R2K0 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC10.09□□□□□ -0.79
PdfS4R2K0 Gm29741-201ENSMUST00000192667 421 ntBASIC10.09□□□□□ -0.79
PdfS4R2K0 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
PdfS4R2K0 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC10.09□□□□□ -0.79
PdfS4R2K0 AC154621.1-201ENSMUST00000226155 1119 ntBASIC10.09□□□□□ -0.79
PdfS4R2K0 AC121598.1-201ENSMUST00000228224 1019 ntBASIC10.09□□□□□ -0.79
PdfS4R2K0 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
PdfS4R2K0 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
PdfS4R2K0 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
PdfS4R2K0 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC10.09□□□□□ -0.79
PdfS4R2K0 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
PdfS4R2K0 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
PdfS4R2K0 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
PdfS4R2K0 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
PdfS4R2K0 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
PdfS4R2K0 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
PdfS4R2K0 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
PdfS4R2K0 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
PdfS4R2K0 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC10.09□□□□□ -0.79
PdfS4R2K0 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
PdfS4R2K0 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
PdfS4R2K0 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
PdfS4R2K0 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
PdfS4R2K0 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
PdfS4R2K0 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
PdfS4R2K0 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC10.08□□□□□ -0.8
PdfS4R2K0 AC159621.2-201ENSMUST00000223519 1326 ntBASIC10.08□□□□□ -0.8
PdfS4R2K0 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
PdfS4R2K0 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
PdfS4R2K0 Phf21a-209ENSMUST00000111297 6188 ntAPPRIS ALT2 TSL 5 BASIC10.08□□□□□ -0.8
PdfS4R2K0 Phf21a-201ENSMUST00000044036 6187 ntAPPRIS ALT2 TSL 5 BASIC10.08□□□□□ -0.8
PdfS4R2K0 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
PdfS4R2K0 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC10.08□□□□□ -0.8
PdfS4R2K0 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
PdfS4R2K0 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
PdfS4R2K0 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
PdfS4R2K0 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC10.08□□□□□ -0.8
PdfS4R2K0 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
PdfS4R2K0 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
PdfS4R2K0 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
PdfS4R2K0 Syt7-202ENSMUST00000076968 6624 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
PdfS4R2K0 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
PdfS4R2K0 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
PdfS4R2K0 Olfr279-203ENSMUST00000216822 5605 ntAPPRIS P1 TSL 5 BASIC10.08□□□□□ -0.8
PdfS4R2K0 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
PdfS4R2K0 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
PdfS4R2K0 Xpot-203ENSMUST00000218004 6005 ntAPPRIS P1 TSL 5 BASIC10.08□□□□□ -0.8
PdfS4R2K0 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
PdfS4R2K0 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC10.08□□□□□ -0.8
PdfS4R2K0 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
PdfS4R2K0 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
PdfS4R2K0 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
PdfS4R2K0 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC10.08□□□□□ -0.8
PdfS4R2K0 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC10.08□□□□□ -0.8
PdfS4R2K0 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC10.08□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms