Protein–RNA interactions for Protein: Q9WUB7

Clcnka, Chloride channel protein ClC-Ka, mousemouse

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClcnkaQ9WUB7 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
ClcnkaQ9WUB7 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
ClcnkaQ9WUB7 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
ClcnkaQ9WUB7 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
ClcnkaQ9WUB7 Tmed9-203ENSMUST00000224741 1450 ntBASIC12.14□□□□□ -0.47
ClcnkaQ9WUB7 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
ClcnkaQ9WUB7 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
ClcnkaQ9WUB7 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
ClcnkaQ9WUB7 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
ClcnkaQ9WUB7 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
ClcnkaQ9WUB7 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
ClcnkaQ9WUB7 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC12.14□□□□□ -0.47
ClcnkaQ9WUB7 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
ClcnkaQ9WUB7 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
ClcnkaQ9WUB7 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
ClcnkaQ9WUB7 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC12.14□□□□□ -0.47
ClcnkaQ9WUB7 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
ClcnkaQ9WUB7 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC12.14□□□□□ -0.47
ClcnkaQ9WUB7 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
ClcnkaQ9WUB7 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
ClcnkaQ9WUB7 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC12.14□□□□□ -0.47
ClcnkaQ9WUB7 Gm7446-201ENSMUST00000221035 1240 ntBASIC12.14□□□□□ -0.47
ClcnkaQ9WUB7 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC12.14□□□□□ -0.47
ClcnkaQ9WUB7 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC12.14□□□□□ -0.47
ClcnkaQ9WUB7 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
ClcnkaQ9WUB7 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
ClcnkaQ9WUB7 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
ClcnkaQ9WUB7 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
ClcnkaQ9WUB7 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
ClcnkaQ9WUB7 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
ClcnkaQ9WUB7 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
ClcnkaQ9WUB7 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
ClcnkaQ9WUB7 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
ClcnkaQ9WUB7 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
ClcnkaQ9WUB7 Gm43273-201ENSMUST00000199649 2594 ntBASIC12.14□□□□□ -0.47
ClcnkaQ9WUB7 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
ClcnkaQ9WUB7 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC12.14□□□□□ -0.47
ClcnkaQ9WUB7 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
ClcnkaQ9WUB7 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
ClcnkaQ9WUB7 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
ClcnkaQ9WUB7 Gm5385-201ENSMUST00000118988 1559 ntBASIC12.13□□□□□ -0.47
ClcnkaQ9WUB7 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
ClcnkaQ9WUB7 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
ClcnkaQ9WUB7 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
ClcnkaQ9WUB7 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
ClcnkaQ9WUB7 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
ClcnkaQ9WUB7 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
ClcnkaQ9WUB7 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
ClcnkaQ9WUB7 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.47
ClcnkaQ9WUB7 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
ClcnkaQ9WUB7 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
ClcnkaQ9WUB7 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
ClcnkaQ9WUB7 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
ClcnkaQ9WUB7 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
ClcnkaQ9WUB7 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC12.13□□□□□ -0.47
ClcnkaQ9WUB7 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
ClcnkaQ9WUB7 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC12.13□□□□□ -0.47
ClcnkaQ9WUB7 Gm12091-201ENSMUST00000146791 830 ntBASIC12.13□□□□□ -0.47
ClcnkaQ9WUB7 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC12.13□□□□□ -0.47
ClcnkaQ9WUB7 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC12.13□□□□□ -0.47
ClcnkaQ9WUB7 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC12.13□□□□□ -0.47
ClcnkaQ9WUB7 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC12.13□□□□□ -0.47
ClcnkaQ9WUB7 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
ClcnkaQ9WUB7 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
ClcnkaQ9WUB7 Gm13127-201ENSMUST00000118978 1389 ntBASIC12.13□□□□□ -0.47
ClcnkaQ9WUB7 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
ClcnkaQ9WUB7 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
ClcnkaQ9WUB7 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
ClcnkaQ9WUB7 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
ClcnkaQ9WUB7 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
ClcnkaQ9WUB7 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
ClcnkaQ9WUB7 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
ClcnkaQ9WUB7 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
ClcnkaQ9WUB7 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
ClcnkaQ9WUB7 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
ClcnkaQ9WUB7 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
ClcnkaQ9WUB7 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC12.13□□□□□ -0.47
ClcnkaQ9WUB7 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
ClcnkaQ9WUB7 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
ClcnkaQ9WUB7 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
ClcnkaQ9WUB7 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
ClcnkaQ9WUB7 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
ClcnkaQ9WUB7 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
ClcnkaQ9WUB7 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
ClcnkaQ9WUB7 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
ClcnkaQ9WUB7 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC12.12□□□□□ -0.47
ClcnkaQ9WUB7 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
ClcnkaQ9WUB7 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
ClcnkaQ9WUB7 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC12.12□□□□□ -0.47
ClcnkaQ9WUB7 Gm15678-201ENSMUST00000117573 960 ntBASIC12.12□□□□□ -0.47
ClcnkaQ9WUB7 Gm14928-201ENSMUST00000120198 477 ntBASIC12.12□□□□□ -0.47
ClcnkaQ9WUB7 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC12.12□□□□□ -0.47
ClcnkaQ9WUB7 Gm23984-201ENSMUST00000157139 203 ntBASIC12.12□□□□□ -0.47
ClcnkaQ9WUB7 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC12.12□□□□□ -0.47
ClcnkaQ9WUB7 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
ClcnkaQ9WUB7 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC12.12□□□□□ -0.47
ClcnkaQ9WUB7 Gm8515-201ENSMUST00000194852 576 ntBASIC12.12□□□□□ -0.47
ClcnkaQ9WUB7 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
ClcnkaQ9WUB7 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
ClcnkaQ9WUB7 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC12.12□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 46.9 ms