Protein–RNA interactions for Protein: Q9JKX8

Upk3a, Uroplakin-3a, mousemouse

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3aQ9JKX8 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Upk3aQ9JKX8 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC12.64□□□□□ -0.39
Upk3aQ9JKX8 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Upk3aQ9JKX8 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Upk3aQ9JKX8 Gm9061-201ENSMUST00000182707 1006 ntBASIC12.64□□□□□ -0.39
Upk3aQ9JKX8 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC12.64□□□□□ -0.39
Upk3aQ9JKX8 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Upk3aQ9JKX8 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC12.64□□□□□ -0.39
Upk3aQ9JKX8 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC12.64□□□□□ -0.39
Upk3aQ9JKX8 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Upk3aQ9JKX8 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Upk3aQ9JKX8 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Upk3aQ9JKX8 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Upk3aQ9JKX8 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Upk3aQ9JKX8 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Upk3aQ9JKX8 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Upk3aQ9JKX8 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Upk3aQ9JKX8 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC12.64□□□□□ -0.39
Upk3aQ9JKX8 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Upk3aQ9JKX8 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Upk3aQ9JKX8 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Upk3aQ9JKX8 Gm45643-201ENSMUST00000211364 1484 ntBASIC12.64□□□□□ -0.39
Upk3aQ9JKX8 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Upk3aQ9JKX8 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Upk3aQ9JKX8 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Upk3aQ9JKX8 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Upk3aQ9JKX8 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Upk3aQ9JKX8 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Upk3aQ9JKX8 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Upk3aQ9JKX8 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Upk3aQ9JKX8 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Upk3aQ9JKX8 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Upk3aQ9JKX8 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Upk3aQ9JKX8 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Upk3aQ9JKX8 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Upk3aQ9JKX8 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Upk3aQ9JKX8 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
Upk3aQ9JKX8 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Upk3aQ9JKX8 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Upk3aQ9JKX8 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Upk3aQ9JKX8 Gm16479-201ENSMUST00000121706 932 ntBASIC12.63□□□□□ -0.39
Upk3aQ9JKX8 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
Upk3aQ9JKX8 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Upk3aQ9JKX8 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Upk3aQ9JKX8 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Upk3aQ9JKX8 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Upk3aQ9JKX8 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Upk3aQ9JKX8 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Upk3aQ9JKX8 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Upk3aQ9JKX8 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Upk3aQ9JKX8 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Upk3aQ9JKX8 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Upk3aQ9JKX8 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Upk3aQ9JKX8 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Upk3aQ9JKX8 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Upk3aQ9JKX8 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Upk3aQ9JKX8 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Upk3aQ9JKX8 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Upk3aQ9JKX8 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Upk3aQ9JKX8 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Upk3aQ9JKX8 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Upk3aQ9JKX8 AC114008.2-201ENSMUST00000227699 1347 ntBASIC12.62□□□□□ -0.39
Upk3aQ9JKX8 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Upk3aQ9JKX8 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Upk3aQ9JKX8 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC12.62□□□□□ -0.39
Upk3aQ9JKX8 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Upk3aQ9JKX8 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Upk3aQ9JKX8 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Upk3aQ9JKX8 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Upk3aQ9JKX8 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Upk3aQ9JKX8 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Upk3aQ9JKX8 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Upk3aQ9JKX8 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Upk3aQ9JKX8 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC12.62□□□□□ -0.39
Upk3aQ9JKX8 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Upk3aQ9JKX8 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Upk3aQ9JKX8 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Upk3aQ9JKX8 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Upk3aQ9JKX8 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Upk3aQ9JKX8 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Upk3aQ9JKX8 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Upk3aQ9JKX8 Gm4984-201ENSMUST00000115987 360 ntBASIC12.62□□□□□ -0.39
Upk3aQ9JKX8 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC12.62□□□□□ -0.39
Upk3aQ9JKX8 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Upk3aQ9JKX8 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC12.62□□□□□ -0.39
Upk3aQ9JKX8 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Upk3aQ9JKX8 Gm38230-201ENSMUST00000193572 1159 ntBASIC12.62□□□□□ -0.39
Upk3aQ9JKX8 Ighv8-10-201ENSMUST00000199579 358 ntBASIC12.62□□□□□ -0.39
Upk3aQ9JKX8 Gm6266-201ENSMUST00000203844 806 ntBASIC12.62□□□□□ -0.39
Upk3aQ9JKX8 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC12.62□□□□□ -0.39
Upk3aQ9JKX8 AC138604.1-201ENSMUST00000226969 739 ntBASIC12.62□□□□□ -0.39
Upk3aQ9JKX8 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC12.62□□□□□ -0.39
Upk3aQ9JKX8 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Upk3aQ9JKX8 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Upk3aQ9JKX8 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Upk3aQ9JKX8 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Upk3aQ9JKX8 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Upk3aQ9JKX8 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Upk3aQ9JKX8 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Upk3aQ9JKX8 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC12.62□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms