Protein–RNA interactions for Protein: Q9ESF1

Otof, Otoferlin, mousemouse

Predictions only

Length 1,997 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OtofQ9ESF1 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
OtofQ9ESF1 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
OtofQ9ESF1 Ptprs-211ENSMUST00000223859 5588 ntBASIC12.95□□□□□ -0.34
OtofQ9ESF1 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
OtofQ9ESF1 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
OtofQ9ESF1 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
OtofQ9ESF1 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
OtofQ9ESF1 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
OtofQ9ESF1 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
OtofQ9ESF1 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
OtofQ9ESF1 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC12.95□□□□□ -0.34
OtofQ9ESF1 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
OtofQ9ESF1 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC12.94□□□□□ -0.34
OtofQ9ESF1 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
OtofQ9ESF1 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC12.94□□□□□ -0.34
OtofQ9ESF1 Gm24255-201ENSMUST00000104481 128 ntBASIC12.94□□□□□ -0.34
OtofQ9ESF1 Gm13492-201ENSMUST00000119772 665 ntBASIC12.94□□□□□ -0.34
OtofQ9ESF1 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC12.94□□□□□ -0.34
OtofQ9ESF1 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
OtofQ9ESF1 Gm6652-201ENSMUST00000186414 1070 ntBASIC12.94□□□□□ -0.34
OtofQ9ESF1 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC12.94□□□□□ -0.34
OtofQ9ESF1 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC12.94□□□□□ -0.34
OtofQ9ESF1 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC12.94□□□□□ -0.34
OtofQ9ESF1 Gm19963-201ENSMUST00000208413 1255 ntBASIC12.94□□□□□ -0.34
OtofQ9ESF1 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
OtofQ9ESF1 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC12.94□□□□□ -0.34
OtofQ9ESF1 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC12.94□□□□□ -0.34
OtofQ9ESF1 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
OtofQ9ESF1 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
OtofQ9ESF1 Gm44065-201ENSMUST00000203184 3527 ntBASIC12.94□□□□□ -0.34
OtofQ9ESF1 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC12.94□□□□□ -0.34
OtofQ9ESF1 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
OtofQ9ESF1 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC12.94□□□□□ -0.34
OtofQ9ESF1 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
OtofQ9ESF1 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC12.94□□□□□ -0.34
OtofQ9ESF1 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
OtofQ9ESF1 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
OtofQ9ESF1 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
OtofQ9ESF1 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC12.94□□□□□ -0.34
OtofQ9ESF1 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC12.94□□□□□ -0.34
OtofQ9ESF1 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
OtofQ9ESF1 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
OtofQ9ESF1 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC12.94□□□□□ -0.34
OtofQ9ESF1 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC12.94□□□□□ -0.34
OtofQ9ESF1 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC12.94□□□□□ -0.34
OtofQ9ESF1 Gm2383-201ENSMUST00000181461 807 ntBASIC12.94□□□□□ -0.34
OtofQ9ESF1 Gm37201-201ENSMUST00000191845 523 ntBASIC12.94□□□□□ -0.34
OtofQ9ESF1 AC155637.1-201ENSMUST00000218560 636 ntBASIC12.94□□□□□ -0.34
OtofQ9ESF1 AC138604.1-201ENSMUST00000226969 739 ntBASIC12.94□□□□□ -0.34
OtofQ9ESF1 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
OtofQ9ESF1 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
OtofQ9ESF1 Gm37795-201ENSMUST00000194216 2459 ntBASIC12.94□□□□□ -0.34
OtofQ9ESF1 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
OtofQ9ESF1 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
OtofQ9ESF1 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
OtofQ9ESF1 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
OtofQ9ESF1 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
OtofQ9ESF1 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
OtofQ9ESF1 Gm4366-201ENSMUST00000201488 1342 ntBASIC12.93□□□□□ -0.34
OtofQ9ESF1 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
OtofQ9ESF1 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
OtofQ9ESF1 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
OtofQ9ESF1 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
OtofQ9ESF1 Gm13736-201ENSMUST00000119272 253 ntBASIC12.93□□□□□ -0.34
OtofQ9ESF1 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
OtofQ9ESF1 Gm5597-201ENSMUST00000182353 1193 ntBASIC12.93□□□□□ -0.34
OtofQ9ESF1 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC12.93□□□□□ -0.34
OtofQ9ESF1 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
OtofQ9ESF1 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC12.93□□□□□ -0.34
OtofQ9ESF1 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
OtofQ9ESF1 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
OtofQ9ESF1 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
OtofQ9ESF1 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
OtofQ9ESF1 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
OtofQ9ESF1 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
OtofQ9ESF1 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
OtofQ9ESF1 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
OtofQ9ESF1 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
OtofQ9ESF1 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
OtofQ9ESF1 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
OtofQ9ESF1 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
OtofQ9ESF1 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
OtofQ9ESF1 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC12.93□□□□□ -0.34
OtofQ9ESF1 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
OtofQ9ESF1 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
OtofQ9ESF1 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
OtofQ9ESF1 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
OtofQ9ESF1 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
OtofQ9ESF1 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
OtofQ9ESF1 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
OtofQ9ESF1 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
OtofQ9ESF1 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
OtofQ9ESF1 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
OtofQ9ESF1 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
OtofQ9ESF1 Gng7-205ENSMUST00000118465 875 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
OtofQ9ESF1 Gm12012-201ENSMUST00000118857 1066 ntBASIC12.92□□□□□ -0.34
OtofQ9ESF1 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC12.92□□□□□ -0.34
OtofQ9ESF1 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC12.92□□□□□ -0.34
OtofQ9ESF1 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC12.92□□□□□ -0.34
OtofQ9ESF1 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC12.92□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms