Protein–RNA interactions for Protein: Q9ES64

Ush1c, Harmonin, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush1cQ9ES64 Gm7104-201ENSMUST00000179741 2532 ntBASIC15.06■□□□□ 0
Ush1cQ9ES64 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ush1cQ9ES64 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC15.06■□□□□ 0
Ush1cQ9ES64 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC15.06■□□□□ 0
Ush1cQ9ES64 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC15.06■□□□□ 0
Ush1cQ9ES64 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ush1cQ9ES64 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ush1cQ9ES64 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Ush1cQ9ES64 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
Ush1cQ9ES64 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC15.05■□□□□ 0
Ush1cQ9ES64 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC15.05■□□□□ 0
Ush1cQ9ES64 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Ush1cQ9ES64 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ 0
Ush1cQ9ES64 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
Ush1cQ9ES64 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC15.05■□□□□ -0
Ush1cQ9ES64 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Ush1cQ9ES64 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC15.05■□□□□ -0
Ush1cQ9ES64 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC15.05■□□□□ -0
Ush1cQ9ES64 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC15.05■□□□□ -0
Ush1cQ9ES64 AC158529.1-201ENSMUST00000223618 239 ntBASIC15.05■□□□□ -0
Ush1cQ9ES64 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC15.05■□□□□ -0
Ush1cQ9ES64 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC15.05■□□□□ -0
Ush1cQ9ES64 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Ush1cQ9ES64 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Ush1cQ9ES64 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
Ush1cQ9ES64 Gm14452-201ENSMUST00000118680 1632 ntBASIC15.05■□□□□ -0
Ush1cQ9ES64 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC15.05■□□□□ -0
Ush1cQ9ES64 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC15.05■□□□□ -0
Ush1cQ9ES64 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
Ush1cQ9ES64 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Ush1cQ9ES64 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC15.05■□□□□ -0
Ush1cQ9ES64 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Ush1cQ9ES64 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Ush1cQ9ES64 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Ush1cQ9ES64 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ush1cQ9ES64 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Ush1cQ9ES64 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ush1cQ9ES64 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Ush1cQ9ES64 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC15.04■□□□□ -0
Ush1cQ9ES64 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Ush1cQ9ES64 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ush1cQ9ES64 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC15.04■□□□□ -0
Ush1cQ9ES64 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC15.04■□□□□ -0
Ush1cQ9ES64 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC15.04■□□□□ -0
Ush1cQ9ES64 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC15.04■□□□□ -0
Ush1cQ9ES64 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ush1cQ9ES64 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ush1cQ9ES64 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC15.04■□□□□ -0
Ush1cQ9ES64 Gm42466-201ENSMUST00000202099 1301 ntBASIC15.04■□□□□ -0
Ush1cQ9ES64 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC15.04■□□□□ -0
Ush1cQ9ES64 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC15.04■□□□□ -0
Ush1cQ9ES64 Gm18737-201ENSMUST00000173594 937 ntBASIC15.04■□□□□ -0
Ush1cQ9ES64 AA619741-201ENSMUST00000195095 646 ntBASIC15.04■□□□□ -0
Ush1cQ9ES64 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC15.04■□□□□ -0
Ush1cQ9ES64 Gm18027-201ENSMUST00000218947 619 ntBASIC15.04■□□□□ -0
Ush1cQ9ES64 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ush1cQ9ES64 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ush1cQ9ES64 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC15.04■□□□□ -0
Ush1cQ9ES64 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC15.04■□□□□ -0
Ush1cQ9ES64 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ush1cQ9ES64 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC15.04■□□□□ -0
Ush1cQ9ES64 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Ush1cQ9ES64 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ush1cQ9ES64 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC15.04■□□□□ -0
Ush1cQ9ES64 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ush1cQ9ES64 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ush1cQ9ES64 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ush1cQ9ES64 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ush1cQ9ES64 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC15.04■□□□□ -0
Ush1cQ9ES64 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC15.04■□□□□ -0
Ush1cQ9ES64 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC15.04■□□□□ -0
Ush1cQ9ES64 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ush1cQ9ES64 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Ush1cQ9ES64 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ush1cQ9ES64 Gm42863-201ENSMUST00000197875 2958 ntBASIC15.03■□□□□ -0
Ush1cQ9ES64 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC15.03■□□□□ -0
Ush1cQ9ES64 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC15.03■□□□□ -0
Ush1cQ9ES64 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Ush1cQ9ES64 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Ush1cQ9ES64 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Ush1cQ9ES64 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC15.03■□□□□ -0
Ush1cQ9ES64 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ush1cQ9ES64 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ush1cQ9ES64 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ush1cQ9ES64 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ush1cQ9ES64 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
Ush1cQ9ES64 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
Ush1cQ9ES64 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ush1cQ9ES64 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC15.03■□□□□ -0
Ush1cQ9ES64 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC15.03■□□□□ -0
Ush1cQ9ES64 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC15.03■□□□□ -0
Ush1cQ9ES64 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC15.03■□□□□ -0
Ush1cQ9ES64 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC15.03■□□□□ -0
Ush1cQ9ES64 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC15.03■□□□□ -0
Ush1cQ9ES64 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC15.03■□□□□ -0
Ush1cQ9ES64 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC15.03■□□□□ -0
Ush1cQ9ES64 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC15.03■□□□□ -0
Ush1cQ9ES64 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ush1cQ9ES64 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC15.03■□□□□ -0
Ush1cQ9ES64 Gm18636-201ENSMUST00000218846 1066 ntBASIC15.03■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms