Protein–RNA interactions for Protein: Q9ERK0

Ripk4, Receptor-interacting serine/threonine-protein kinase 4, mousemouse

Predictions only

Length 786 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ripk4Q9ERK0 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ripk4Q9ERK0 Gm3695-201ENSMUST00000087222 1009 ntBASIC16.04■□□□□ 0.16
Ripk4Q9ERK0 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ripk4Q9ERK0 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC16.04■□□□□ 0.16
Ripk4Q9ERK0 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Ripk4Q9ERK0 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ripk4Q9ERK0 Gm7002-201ENSMUST00000221386 2165 ntBASIC16.04■□□□□ 0.16
Ripk4Q9ERK0 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ripk4Q9ERK0 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ripk4Q9ERK0 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Ripk4Q9ERK0 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Ripk4Q9ERK0 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ripk4Q9ERK0 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ripk4Q9ERK0 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Ripk4Q9ERK0 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ripk4Q9ERK0 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ripk4Q9ERK0 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Ripk4Q9ERK0 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC16.04■□□□□ 0.16
Ripk4Q9ERK0 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ripk4Q9ERK0 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ripk4Q9ERK0 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ripk4Q9ERK0 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC16.03■□□□□ 0.16
Ripk4Q9ERK0 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ripk4Q9ERK0 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ripk4Q9ERK0 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ripk4Q9ERK0 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ripk4Q9ERK0 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC16.03■□□□□ 0.16
Ripk4Q9ERK0 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ripk4Q9ERK0 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Ripk4Q9ERK0 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ripk4Q9ERK0 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ripk4Q9ERK0 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
Ripk4Q9ERK0 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Ripk4Q9ERK0 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ripk4Q9ERK0 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ripk4Q9ERK0 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC16.03■□□□□ 0.16
Ripk4Q9ERK0 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ripk4Q9ERK0 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ripk4Q9ERK0 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC16.03■□□□□ 0.16
Ripk4Q9ERK0 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Ripk4Q9ERK0 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Ripk4Q9ERK0 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC16.03■□□□□ 0.16
Ripk4Q9ERK0 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC16.03■□□□□ 0.16
Ripk4Q9ERK0 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC16.03■□□□□ 0.16
Ripk4Q9ERK0 Gm26927-201ENSMUST00000182385 965 ntBASIC16.03■□□□□ 0.16
Ripk4Q9ERK0 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Ripk4Q9ERK0 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ripk4Q9ERK0 Gm38002-201ENSMUST00000193255 180 ntBASIC16.03■□□□□ 0.16
Ripk4Q9ERK0 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ripk4Q9ERK0 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ripk4Q9ERK0 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ripk4Q9ERK0 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ripk4Q9ERK0 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ripk4Q9ERK0 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Ripk4Q9ERK0 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ripk4Q9ERK0 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Ripk4Q9ERK0 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ripk4Q9ERK0 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ripk4Q9ERK0 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Ripk4Q9ERK0 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC16.03■□□□□ 0.16
Ripk4Q9ERK0 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ripk4Q9ERK0 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ripk4Q9ERK0 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Ripk4Q9ERK0 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ripk4Q9ERK0 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ripk4Q9ERK0 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC16.02■□□□□ 0.16
Ripk4Q9ERK0 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ripk4Q9ERK0 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ripk4Q9ERK0 Gm5620-201ENSMUST00000077991 1348 ntBASIC16.02■□□□□ 0.16
Ripk4Q9ERK0 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Ripk4Q9ERK0 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ripk4Q9ERK0 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ripk4Q9ERK0 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Ripk4Q9ERK0 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC16.02■□□□□ 0.16
Ripk4Q9ERK0 Gm42627-201ENSMUST00000197347 224 ntBASIC16.02■□□□□ 0.16
Ripk4Q9ERK0 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ripk4Q9ERK0 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC16.02■□□□□ 0.16
Ripk4Q9ERK0 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Ripk4Q9ERK0 Gm7172-201ENSMUST00000218047 1152 ntBASIC16.02■□□□□ 0.16
Ripk4Q9ERK0 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ripk4Q9ERK0 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Ripk4Q9ERK0 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Ripk4Q9ERK0 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Ripk4Q9ERK0 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Ripk4Q9ERK0 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Ripk4Q9ERK0 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Ripk4Q9ERK0 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC16.02■□□□□ 0.15
Ripk4Q9ERK0 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
Ripk4Q9ERK0 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Ripk4Q9ERK0 Pck2-205ENSMUST00000226352 2784 ntBASIC16.02■□□□□ 0.15
Ripk4Q9ERK0 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Ripk4Q9ERK0 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC16.02■□□□□ 0.15
Ripk4Q9ERK0 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Ripk4Q9ERK0 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Ripk4Q9ERK0 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ripk4Q9ERK0 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Ripk4Q9ERK0 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Ripk4Q9ERK0 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Ripk4Q9ERK0 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC16.01■□□□□ 0.15
Ripk4Q9ERK0 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC16.01■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 48 ms