Protein–RNA interactions for Protein: Q9ERD7

Tubb3, Tubulin beta-3 chain, mousemouse

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb3Q9ERD7 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Tubb3Q9ERD7 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Tubb3Q9ERD7 Gm37015-201ENSMUST00000192763 1521 ntBASIC13.08□□□□□ -0.32
Tubb3Q9ERD7 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Tubb3Q9ERD7 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Tubb3Q9ERD7 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Tubb3Q9ERD7 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Tubb3Q9ERD7 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Tubb3Q9ERD7 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Tubb3Q9ERD7 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Tubb3Q9ERD7 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Tubb3Q9ERD7 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Tubb3Q9ERD7 Gm8131-201ENSMUST00000213783 1570 ntBASIC13.07□□□□□ -0.32
Tubb3Q9ERD7 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Tubb3Q9ERD7 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Tubb3Q9ERD7 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Tubb3Q9ERD7 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC13.07□□□□□ -0.32
Tubb3Q9ERD7 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Tubb3Q9ERD7 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Tubb3Q9ERD7 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Tubb3Q9ERD7 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Tubb3Q9ERD7 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Tubb3Q9ERD7 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC13.07□□□□□ -0.32
Tubb3Q9ERD7 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC13.07□□□□□ -0.32
Tubb3Q9ERD7 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC13.07□□□□□ -0.32
Tubb3Q9ERD7 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC13.07□□□□□ -0.32
Tubb3Q9ERD7 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Tubb3Q9ERD7 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Tubb3Q9ERD7 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
Tubb3Q9ERD7 Gm5356-201ENSMUST00000093326 615 ntBASIC13.07□□□□□ -0.32
Tubb3Q9ERD7 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Tubb3Q9ERD7 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Tubb3Q9ERD7 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Tubb3Q9ERD7 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Tubb3Q9ERD7 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Tubb3Q9ERD7 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Tubb3Q9ERD7 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Tubb3Q9ERD7 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Tubb3Q9ERD7 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC13.07□□□□□ -0.32
Tubb3Q9ERD7 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Tubb3Q9ERD7 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Tubb3Q9ERD7 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Tubb3Q9ERD7 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Tubb3Q9ERD7 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Tubb3Q9ERD7 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Tubb3Q9ERD7 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Tubb3Q9ERD7 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Tubb3Q9ERD7 Gm42829-201ENSMUST00000198417 2585 ntBASIC13.06□□□□□ -0.32
Tubb3Q9ERD7 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Tubb3Q9ERD7 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Tubb3Q9ERD7 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Tubb3Q9ERD7 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Tubb3Q9ERD7 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Tubb3Q9ERD7 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC13.06□□□□□ -0.32
Tubb3Q9ERD7 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Tubb3Q9ERD7 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Tubb3Q9ERD7 Gm15824-201ENSMUST00000119516 955 ntBASIC13.06□□□□□ -0.32
Tubb3Q9ERD7 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC13.06□□□□□ -0.32
Tubb3Q9ERD7 Gm12416-201ENSMUST00000120911 1008 ntBASIC13.06□□□□□ -0.32
Tubb3Q9ERD7 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Tubb3Q9ERD7 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC13.06□□□□□ -0.32
Tubb3Q9ERD7 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Tubb3Q9ERD7 Mir7221-201ENSMUST00000184009 72 ntBASIC13.06□□□□□ -0.32
Tubb3Q9ERD7 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC13.06□□□□□ -0.32
Tubb3Q9ERD7 Gm43438-201ENSMUST00000198133 379 ntBASIC13.06□□□□□ -0.32
Tubb3Q9ERD7 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Tubb3Q9ERD7 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Tubb3Q9ERD7 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Tubb3Q9ERD7 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Tubb3Q9ERD7 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Tubb3Q9ERD7 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC13.06□□□□□ -0.32
Tubb3Q9ERD7 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC13.06□□□□□ -0.32
Tubb3Q9ERD7 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Tubb3Q9ERD7 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Tubb3Q9ERD7 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Tubb3Q9ERD7 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Tubb3Q9ERD7 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC13.06□□□□□ -0.32
Tubb3Q9ERD7 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Tubb3Q9ERD7 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Tubb3Q9ERD7 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Tubb3Q9ERD7 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Tubb3Q9ERD7 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Tubb3Q9ERD7 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Tubb3Q9ERD7 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Tubb3Q9ERD7 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Tubb3Q9ERD7 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Tubb3Q9ERD7 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Tubb3Q9ERD7 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Tubb3Q9ERD7 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Tubb3Q9ERD7 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Tubb3Q9ERD7 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Tubb3Q9ERD7 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Tubb3Q9ERD7 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Tubb3Q9ERD7 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
Tubb3Q9ERD7 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Tubb3Q9ERD7 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Tubb3Q9ERD7 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC13.05□□□□□ -0.32
Tubb3Q9ERD7 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC13.05□□□□□ -0.32
Tubb3Q9ERD7 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC13.05□□□□□ -0.32
Tubb3Q9ERD7 Gm45841-201ENSMUST00000207700 164 ntBASIC13.05□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms