Protein–RNA interactions for Protein: Q9DC53

Cpne8, Copine-8, mousemouse

Predictions only

Length 577 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne8Q9DC53 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cpne8Q9DC53 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC13.7□□□□□ -0.22
Cpne8Q9DC53 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cpne8Q9DC53 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Cpne8Q9DC53 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cpne8Q9DC53 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC13.7□□□□□ -0.22
Cpne8Q9DC53 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC13.7□□□□□ -0.22
Cpne8Q9DC53 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cpne8Q9DC53 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Cpne8Q9DC53 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC13.7□□□□□ -0.22
Cpne8Q9DC53 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Cpne8Q9DC53 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cpne8Q9DC53 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cpne8Q9DC53 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC13.7□□□□□ -0.22
Cpne8Q9DC53 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cpne8Q9DC53 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cpne8Q9DC53 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Cpne8Q9DC53 Gm15429-201ENSMUST00000151268 798 ntBASIC13.7□□□□□ -0.22
Cpne8Q9DC53 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cpne8Q9DC53 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cpne8Q9DC53 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cpne8Q9DC53 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cpne8Q9DC53 Mir6977-201ENSMUST00000184960 64 ntBASIC13.7□□□□□ -0.22
Cpne8Q9DC53 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Cpne8Q9DC53 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC13.7□□□□□ -0.22
Cpne8Q9DC53 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC13.7□□□□□ -0.22
Cpne8Q9DC53 Gm6983-201ENSMUST00000214912 628 ntBASIC13.7□□□□□ -0.22
Cpne8Q9DC53 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC13.7□□□□□ -0.22
Cpne8Q9DC53 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cpne8Q9DC53 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC13.7□□□□□ -0.22
Cpne8Q9DC53 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cpne8Q9DC53 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Cpne8Q9DC53 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cpne8Q9DC53 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Cpne8Q9DC53 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cpne8Q9DC53 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Cpne8Q9DC53 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cpne8Q9DC53 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cpne8Q9DC53 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cpne8Q9DC53 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cpne8Q9DC53 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Cpne8Q9DC53 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Cpne8Q9DC53 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Cpne8Q9DC53 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cpne8Q9DC53 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cpne8Q9DC53 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Cpne8Q9DC53 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cpne8Q9DC53 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cpne8Q9DC53 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cpne8Q9DC53 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Cpne8Q9DC53 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Cpne8Q9DC53 Gm45643-201ENSMUST00000211364 1484 ntBASIC13.69□□□□□ -0.22
Cpne8Q9DC53 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
Cpne8Q9DC53 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Cpne8Q9DC53 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cpne8Q9DC53 Gm11978-201ENSMUST00000122315 466 ntBASIC13.69□□□□□ -0.22
Cpne8Q9DC53 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC13.69□□□□□ -0.22
Cpne8Q9DC53 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Cpne8Q9DC53 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC13.69□□□□□ -0.22
Cpne8Q9DC53 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
Cpne8Q9DC53 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Cpne8Q9DC53 Gm19931-201ENSMUST00000198920 368 ntBASIC13.69□□□□□ -0.22
Cpne8Q9DC53 Gm44064-201ENSMUST00000204964 1087 ntBASIC13.69□□□□□ -0.22
Cpne8Q9DC53 AC162801.1-201ENSMUST00000220612 198 ntBASIC13.69□□□□□ -0.22
Cpne8Q9DC53 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
Cpne8Q9DC53 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cpne8Q9DC53 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cpne8Q9DC53 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cpne8Q9DC53 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cpne8Q9DC53 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cpne8Q9DC53 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cpne8Q9DC53 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cpne8Q9DC53 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cpne8Q9DC53 Gm17435-202ENSMUST00000212699 1998 ntBASIC13.69□□□□□ -0.22
Cpne8Q9DC53 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cpne8Q9DC53 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cpne8Q9DC53 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cpne8Q9DC53 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cpne8Q9DC53 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cpne8Q9DC53 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cpne8Q9DC53 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC13.68□□□□□ -0.22
Cpne8Q9DC53 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cpne8Q9DC53 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC13.68□□□□□ -0.22
Cpne8Q9DC53 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cpne8Q9DC53 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Cpne8Q9DC53 Gm5912-201ENSMUST00000122282 1438 ntBASIC13.68□□□□□ -0.22
Cpne8Q9DC53 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Cpne8Q9DC53 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC13.68□□□□□ -0.22
Cpne8Q9DC53 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC13.68□□□□□ -0.22
Cpne8Q9DC53 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC13.68□□□□□ -0.22
Cpne8Q9DC53 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC13.68□□□□□ -0.22
Cpne8Q9DC53 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC13.68□□□□□ -0.22
Cpne8Q9DC53 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Cpne8Q9DC53 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC13.68□□□□□ -0.22
Cpne8Q9DC53 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC13.68□□□□□ -0.22
Cpne8Q9DC53 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC13.68□□□□□ -0.22
Cpne8Q9DC53 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cpne8Q9DC53 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cpne8Q9DC53 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Cpne8Q9DC53 Gm38385-201ENSMUST00000194454 2351 ntBASIC13.68□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 65.5 ms