Protein–RNA interactions for Protein: Q9DC33

Hmg20a, High mobility group protein 20A, mousemouse

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmg20aQ9DC33 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Hmg20aQ9DC33 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC11.99□□□□□ -0.49
Hmg20aQ9DC33 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Hmg20aQ9DC33 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Hmg20aQ9DC33 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC11.99□□□□□ -0.49
Hmg20aQ9DC33 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Hmg20aQ9DC33 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Hmg20aQ9DC33 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Hmg20aQ9DC33 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC11.99□□□□□ -0.49
Hmg20aQ9DC33 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Hmg20aQ9DC33 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC11.99□□□□□ -0.49
Hmg20aQ9DC33 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Hmg20aQ9DC33 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Hmg20aQ9DC33 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC11.99□□□□□ -0.49
Hmg20aQ9DC33 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Hmg20aQ9DC33 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Hmg20aQ9DC33 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Hmg20aQ9DC33 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
Hmg20aQ9DC33 Fosb-203ENSMUST00000207716 3546 ntTSL 5 BASIC11.98□□□□□ -0.49
Hmg20aQ9DC33 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Hmg20aQ9DC33 Dach2-201ENSMUST00000067219 2520 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Hmg20aQ9DC33 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Hmg20aQ9DC33 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Hmg20aQ9DC33 Rbms2-201ENSMUST00000092033 1481 ntAPPRIS P4 TSL 1 (best) BASIC11.98□□□□□ -0.49
Hmg20aQ9DC33 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC11.98□□□□□ -0.49
Hmg20aQ9DC33 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Hmg20aQ9DC33 Gm15957-201ENSMUST00000118893 974 ntBASIC11.98□□□□□ -0.49
Hmg20aQ9DC33 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Hmg20aQ9DC33 Gm27920-201ENSMUST00000183953 96 ntBASIC11.98□□□□□ -0.49
Hmg20aQ9DC33 Gm44492-201ENSMUST00000197012 141 ntBASIC11.98□□□□□ -0.49
Hmg20aQ9DC33 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Hmg20aQ9DC33 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Hmg20aQ9DC33 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Hmg20aQ9DC33 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC11.98□□□□□ -0.49
Hmg20aQ9DC33 Psmb5-202ENSMUST00000227257 622 ntBASIC11.98□□□□□ -0.49
Hmg20aQ9DC33 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Hmg20aQ9DC33 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Hmg20aQ9DC33 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Hmg20aQ9DC33 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Hmg20aQ9DC33 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC11.98□□□□□ -0.49
Hmg20aQ9DC33 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Hmg20aQ9DC33 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Hmg20aQ9DC33 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC11.98□□□□□ -0.49
Hmg20aQ9DC33 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC11.98□□□□□ -0.49
Hmg20aQ9DC33 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Hmg20aQ9DC33 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Hmg20aQ9DC33 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Hmg20aQ9DC33 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC11.98□□□□□ -0.49
Hmg20aQ9DC33 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Hmg20aQ9DC33 Thsd4-202ENSMUST00000098660 8796 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Hmg20aQ9DC33 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Hmg20aQ9DC33 Gm26684-202ENSMUST00000228229 8257 ntBASIC11.98□□□□□ -0.49
Hmg20aQ9DC33 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Hmg20aQ9DC33 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Hmg20aQ9DC33 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC11.97□□□□□ -0.49
Hmg20aQ9DC33 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC11.97□□□□□ -0.49
Hmg20aQ9DC33 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Hmg20aQ9DC33 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Hmg20aQ9DC33 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
Hmg20aQ9DC33 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Hmg20aQ9DC33 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Hmg20aQ9DC33 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Hmg20aQ9DC33 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Hmg20aQ9DC33 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Hmg20aQ9DC33 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Hmg20aQ9DC33 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC11.97□□□□□ -0.49
Hmg20aQ9DC33 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Hmg20aQ9DC33 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC11.97□□□□□ -0.49
Hmg20aQ9DC33 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Hmg20aQ9DC33 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Hmg20aQ9DC33 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC11.97□□□□□ -0.49
Hmg20aQ9DC33 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Hmg20aQ9DC33 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Hmg20aQ9DC33 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC11.97□□□□□ -0.49
Hmg20aQ9DC33 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC11.97□□□□□ -0.49
Hmg20aQ9DC33 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Hmg20aQ9DC33 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Hmg20aQ9DC33 Gm44945-201ENSMUST00000206764 1187 ntBASIC11.97□□□□□ -0.49
Hmg20aQ9DC33 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC11.97□□□□□ -0.49
Hmg20aQ9DC33 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Hmg20aQ9DC33 AC154572.2-201ENSMUST00000225105 997 ntBASIC11.97□□□□□ -0.49
Hmg20aQ9DC33 AC159295.1-201ENSMUST00000225326 940 ntBASIC11.97□□□□□ -0.49
Hmg20aQ9DC33 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Hmg20aQ9DC33 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Hmg20aQ9DC33 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Hmg20aQ9DC33 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Hmg20aQ9DC33 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Hmg20aQ9DC33 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
Hmg20aQ9DC33 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC11.97□□□□□ -0.49
Hmg20aQ9DC33 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Hmg20aQ9DC33 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Hmg20aQ9DC33 Crybg2-201ENSMUST00000121391 4761 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Hmg20aQ9DC33 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC11.97□□□□□ -0.49
Hmg20aQ9DC33 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Hmg20aQ9DC33 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Hmg20aQ9DC33 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Hmg20aQ9DC33 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Hmg20aQ9DC33 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Hmg20aQ9DC33 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Hmg20aQ9DC33 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms