Protein–RNA interactions for Protein: Q9DB34

Chmp2a, Charged multivesicular body protein 2a, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2aQ9DB34 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Chmp2aQ9DB34 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
Chmp2aQ9DB34 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Chmp2aQ9DB34 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Chmp2aQ9DB34 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Chmp2aQ9DB34 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Chmp2aQ9DB34 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Chmp2aQ9DB34 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Chmp2aQ9DB34 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Chmp2aQ9DB34 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Chmp2aQ9DB34 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Chmp2aQ9DB34 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Chmp2aQ9DB34 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC13.72□□□□□ -0.21
Chmp2aQ9DB34 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC13.72□□□□□ -0.21
Chmp2aQ9DB34 Gm13612-201ENSMUST00000119276 390 ntBASIC13.72□□□□□ -0.21
Chmp2aQ9DB34 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Chmp2aQ9DB34 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Chmp2aQ9DB34 Gm8652-201ENSMUST00000181363 964 ntBASIC13.72□□□□□ -0.21
Chmp2aQ9DB34 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Chmp2aQ9DB34 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC13.72□□□□□ -0.21
Chmp2aQ9DB34 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC13.72□□□□□ -0.21
Chmp2aQ9DB34 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Chmp2aQ9DB34 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Chmp2aQ9DB34 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC13.72□□□□□ -0.21
Chmp2aQ9DB34 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Chmp2aQ9DB34 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Chmp2aQ9DB34 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Chmp2aQ9DB34 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Chmp2aQ9DB34 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Chmp2aQ9DB34 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Chmp2aQ9DB34 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Chmp2aQ9DB34 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC13.72□□□□□ -0.21
Chmp2aQ9DB34 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC13.72□□□□□ -0.21
Chmp2aQ9DB34 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Chmp2aQ9DB34 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Chmp2aQ9DB34 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Chmp2aQ9DB34 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Chmp2aQ9DB34 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Chmp2aQ9DB34 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Chmp2aQ9DB34 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Chmp2aQ9DB34 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Chmp2aQ9DB34 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Chmp2aQ9DB34 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Chmp2aQ9DB34 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Chmp2aQ9DB34 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Chmp2aQ9DB34 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Chmp2aQ9DB34 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Chmp2aQ9DB34 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Chmp2aQ9DB34 Gm37691-201ENSMUST00000192147 2573 ntBASIC13.71□□□□□ -0.21
Chmp2aQ9DB34 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Chmp2aQ9DB34 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Chmp2aQ9DB34 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Chmp2aQ9DB34 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Chmp2aQ9DB34 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC13.71□□□□□ -0.21
Chmp2aQ9DB34 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC13.71□□□□□ -0.21
Chmp2aQ9DB34 Gm27486-201ENSMUST00000184923 80 ntBASIC13.71□□□□□ -0.21
Chmp2aQ9DB34 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC13.71□□□□□ -0.21
Chmp2aQ9DB34 Gm42929-201ENSMUST00000198374 1286 ntBASIC13.71□□□□□ -0.21
Chmp2aQ9DB34 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC13.71□□□□□ -0.21
Chmp2aQ9DB34 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Chmp2aQ9DB34 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Chmp2aQ9DB34 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Chmp2aQ9DB34 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Chmp2aQ9DB34 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Chmp2aQ9DB34 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Chmp2aQ9DB34 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Chmp2aQ9DB34 AC122314.1-201ENSMUST00000223056 2239 ntBASIC13.71□□□□□ -0.22
Chmp2aQ9DB34 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Chmp2aQ9DB34 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
Chmp2aQ9DB34 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
Chmp2aQ9DB34 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Chmp2aQ9DB34 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Chmp2aQ9DB34 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Chmp2aQ9DB34 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Chmp2aQ9DB34 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Chmp2aQ9DB34 Gm45242-201ENSMUST00000210666 2129 ntBASIC13.7□□□□□ -0.22
Chmp2aQ9DB34 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC13.7□□□□□ -0.22
Chmp2aQ9DB34 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Chmp2aQ9DB34 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Chmp2aQ9DB34 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Chmp2aQ9DB34 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC13.7□□□□□ -0.22
Chmp2aQ9DB34 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Chmp2aQ9DB34 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Chmp2aQ9DB34 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Chmp2aQ9DB34 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Chmp2aQ9DB34 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Chmp2aQ9DB34 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC13.7□□□□□ -0.22
Chmp2aQ9DB34 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC13.7□□□□□ -0.22
Chmp2aQ9DB34 Gm4984-201ENSMUST00000115987 360 ntBASIC13.7□□□□□ -0.22
Chmp2aQ9DB34 Gm14350-201ENSMUST00000116642 640 ntBASIC13.7□□□□□ -0.22
Chmp2aQ9DB34 Gm5687-201ENSMUST00000118252 640 ntBASIC13.7□□□□□ -0.22
Chmp2aQ9DB34 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC13.7□□□□□ -0.22
Chmp2aQ9DB34 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC13.7□□□□□ -0.22
Chmp2aQ9DB34 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Chmp2aQ9DB34 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC13.7□□□□□ -0.22
Chmp2aQ9DB34 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Chmp2aQ9DB34 Gm9124-201ENSMUST00000191789 1092 ntBASIC13.7□□□□□ -0.22
Chmp2aQ9DB34 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Chmp2aQ9DB34 Gm9113-201ENSMUST00000192510 1018 ntBASIC13.7□□□□□ -0.22
Chmp2aQ9DB34 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC13.7□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 46.4 ms