Protein–RNA interactions for Protein: Q9D883

U2af1, Splicing factor U2AF 35 kDa subunit, mousemouse

Known RBP Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2af1Q9D883 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
U2af1Q9D883 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC17.27■□□□□ 0.36
U2af1Q9D883 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
U2af1Q9D883 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
U2af1Q9D883 Gm9924-202ENSMUST00000192760 2311 ntBASIC17.27■□□□□ 0.35
U2af1Q9D883 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC17.27■□□□□ 0.35
U2af1Q9D883 Gm15459-201ENSMUST00000117405 1941 ntBASIC17.27■□□□□ 0.35
U2af1Q9D883 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
U2af1Q9D883 Gm8355-201ENSMUST00000177767 1941 ntBASIC17.27■□□□□ 0.35
U2af1Q9D883 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC17.27■□□□□ 0.35
U2af1Q9D883 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
U2af1Q9D883 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC17.27■□□□□ 0.35
U2af1Q9D883 AC101945.2-201ENSMUST00000227886 1377 ntBASIC17.27■□□□□ 0.35
U2af1Q9D883 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
U2af1Q9D883 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
U2af1Q9D883 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
U2af1Q9D883 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
U2af1Q9D883 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
U2af1Q9D883 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
U2af1Q9D883 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
U2af1Q9D883 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
U2af1Q9D883 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
U2af1Q9D883 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
U2af1Q9D883 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
U2af1Q9D883 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
U2af1Q9D883 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
U2af1Q9D883 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
U2af1Q9D883 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
U2af1Q9D883 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC17.26■□□□□ 0.35
U2af1Q9D883 Gm5187-201ENSMUST00000117317 991 ntBASIC17.26■□□□□ 0.35
U2af1Q9D883 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC17.26■□□□□ 0.35
U2af1Q9D883 Trav4d-2-201ENSMUST00000120914 335 ntBASIC17.26■□□□□ 0.35
U2af1Q9D883 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC17.26■□□□□ 0.35
U2af1Q9D883 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
U2af1Q9D883 Gm26185-201ENSMUST00000157692 266 ntBASIC17.26■□□□□ 0.35
U2af1Q9D883 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
U2af1Q9D883 Gm43630-201ENSMUST00000201550 776 ntBASIC17.26■□□□□ 0.35
U2af1Q9D883 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
U2af1Q9D883 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
U2af1Q9D883 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
U2af1Q9D883 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
U2af1Q9D883 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
U2af1Q9D883 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
U2af1Q9D883 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
U2af1Q9D883 Gm37795-201ENSMUST00000194216 2459 ntBASIC17.26■□□□□ 0.35
U2af1Q9D883 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
U2af1Q9D883 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
U2af1Q9D883 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
U2af1Q9D883 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
U2af1Q9D883 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC17.25■□□□□ 0.35
U2af1Q9D883 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
U2af1Q9D883 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
U2af1Q9D883 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC17.25■□□□□ 0.35
U2af1Q9D883 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
U2af1Q9D883 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
U2af1Q9D883 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
U2af1Q9D883 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
U2af1Q9D883 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
U2af1Q9D883 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
U2af1Q9D883 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC17.25■□□□□ 0.35
U2af1Q9D883 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
U2af1Q9D883 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
U2af1Q9D883 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
U2af1Q9D883 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
U2af1Q9D883 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
U2af1Q9D883 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
U2af1Q9D883 Gm13392-201ENSMUST00000117708 150 ntBASIC17.25■□□□□ 0.35
U2af1Q9D883 Gm11637-201ENSMUST00000120601 592 ntBASIC17.25■□□□□ 0.35
U2af1Q9D883 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
U2af1Q9D883 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
U2af1Q9D883 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
U2af1Q9D883 Gm5896-201ENSMUST00000189662 1024 ntBASIC17.25■□□□□ 0.35
U2af1Q9D883 Gm38297-201ENSMUST00000195122 1057 ntBASIC17.25■□□□□ 0.35
U2af1Q9D883 Gm19931-201ENSMUST00000198920 368 ntBASIC17.25■□□□□ 0.35
U2af1Q9D883 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
U2af1Q9D883 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
U2af1Q9D883 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
U2af1Q9D883 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
U2af1Q9D883 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
U2af1Q9D883 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
U2af1Q9D883 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
U2af1Q9D883 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
U2af1Q9D883 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
U2af1Q9D883 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
U2af1Q9D883 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
U2af1Q9D883 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
U2af1Q9D883 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
U2af1Q9D883 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
U2af1Q9D883 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC17.24■□□□□ 0.35
U2af1Q9D883 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
U2af1Q9D883 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC17.24■□□□□ 0.35
U2af1Q9D883 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
U2af1Q9D883 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
U2af1Q9D883 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
U2af1Q9D883 Gm12363-201ENSMUST00000122250 668 ntBASIC17.24■□□□□ 0.35
U2af1Q9D883 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
U2af1Q9D883 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC17.24■□□□□ 0.35
U2af1Q9D883 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC17.24■□□□□ 0.35
U2af1Q9D883 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC17.24■□□□□ 0.35
U2af1Q9D883 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC17.24■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms