Protein–RNA interactions for Protein: Q9D2H5

Trim42, Tripartite motif-containing protein 42, mousemouse

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42Q9D2H5 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim42Q9D2H5 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim42Q9D2H5 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
Trim42Q9D2H5 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim42Q9D2H5 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trim42Q9D2H5 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC13.18□□□□□ -0.3
Trim42Q9D2H5 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim42Q9D2H5 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trim42Q9D2H5 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim42Q9D2H5 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Trim42Q9D2H5 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim42Q9D2H5 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim42Q9D2H5 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trim42Q9D2H5 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim42Q9D2H5 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim42Q9D2H5 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Trim42Q9D2H5 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim42Q9D2H5 Gm5989-201ENSMUST00000096092 2077 ntBASIC13.17□□□□□ -0.3
Trim42Q9D2H5 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Trim42Q9D2H5 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim42Q9D2H5 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim42Q9D2H5 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim42Q9D2H5 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC13.17□□□□□ -0.3
Trim42Q9D2H5 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Trim42Q9D2H5 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim42Q9D2H5 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC13.17□□□□□ -0.3
Trim42Q9D2H5 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim42Q9D2H5 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim42Q9D2H5 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim42Q9D2H5 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC13.17□□□□□ -0.3
Trim42Q9D2H5 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC13.17□□□□□ -0.3
Trim42Q9D2H5 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trim42Q9D2H5 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC13.17□□□□□ -0.3
Trim42Q9D2H5 4930412F09Rik-201ENSMUST00000139006 1017 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trim42Q9D2H5 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim42Q9D2H5 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC13.17□□□□□ -0.3
Trim42Q9D2H5 Gm9824-201ENSMUST00000178707 561 ntBASIC13.17□□□□□ -0.3
Trim42Q9D2H5 Gm27525-201ENSMUST00000184465 107 ntBASIC13.17□□□□□ -0.3
Trim42Q9D2H5 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC13.17□□□□□ -0.3
Trim42Q9D2H5 Gm19817-201ENSMUST00000199764 2132 ntBASIC13.17□□□□□ -0.3
Trim42Q9D2H5 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trim42Q9D2H5 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim42Q9D2H5 A430010J10Rik-201ENSMUST00000054470 408 ntBASIC13.17□□□□□ -0.3
Trim42Q9D2H5 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trim42Q9D2H5 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trim42Q9D2H5 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim42Q9D2H5 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Trim42Q9D2H5 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim42Q9D2H5 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trim42Q9D2H5 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim42Q9D2H5 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC13.17□□□□□ -0.3
Trim42Q9D2H5 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Trim42Q9D2H5 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trim42Q9D2H5 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim42Q9D2H5 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim42Q9D2H5 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim42Q9D2H5 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
Trim42Q9D2H5 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim42Q9D2H5 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Trim42Q9D2H5 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim42Q9D2H5 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim42Q9D2H5 Fosb-203ENSMUST00000207716 3546 ntTSL 5 BASIC13.16□□□□□ -0.3
Trim42Q9D2H5 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Trim42Q9D2H5 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim42Q9D2H5 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim42Q9D2H5 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC13.16□□□□□ -0.3
Trim42Q9D2H5 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim42Q9D2H5 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim42Q9D2H5 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Trim42Q9D2H5 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim42Q9D2H5 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trim42Q9D2H5 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trim42Q9D2H5 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC13.16□□□□□ -0.3
Trim42Q9D2H5 Gm12260-201ENSMUST00000122447 411 ntBASIC13.16□□□□□ -0.3
Trim42Q9D2H5 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Trim42Q9D2H5 Gm21470-201ENSMUST00000187680 696 ntBASIC13.16□□□□□ -0.3
Trim42Q9D2H5 Gm37102-201ENSMUST00000195740 1105 ntBASIC13.16□□□□□ -0.3
Trim42Q9D2H5 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC13.16□□□□□ -0.3
Trim42Q9D2H5 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC13.16□□□□□ -0.3
Trim42Q9D2H5 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC13.16□□□□□ -0.3
Trim42Q9D2H5 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC13.16□□□□□ -0.3
Trim42Q9D2H5 Gm45609-206ENSMUST00000210176 1023 ntTSL 5 BASIC13.16□□□□□ -0.3
Trim42Q9D2H5 Gm32390-201ENSMUST00000212713 1172 ntBASIC13.16□□□□□ -0.3
Trim42Q9D2H5 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trim42Q9D2H5 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim42Q9D2H5 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim42Q9D2H5 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim42Q9D2H5 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim42Q9D2H5 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim42Q9D2H5 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Trim42Q9D2H5 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC13.16□□□□□ -0.3
Trim42Q9D2H5 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trim42Q9D2H5 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim42Q9D2H5 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC13.16□□□□□ -0.3
Trim42Q9D2H5 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Trim42Q9D2H5 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim42Q9D2H5 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim42Q9D2H5 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim42Q9D2H5 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim42Q9D2H5 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 48.6 ms