Protein–RNA interactions for Protein: Q99PP7

Trim33, E3 ubiquitin-protein ligase TRIM33, mousemouse

Predictions only

Length 1,142 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim33Q99PP7 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim33Q99PP7 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trim33Q99PP7 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Trim33Q99PP7 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim33Q99PP7 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trim33Q99PP7 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC13.1□□□□□ -0.31
Trim33Q99PP7 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trim33Q99PP7 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim33Q99PP7 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim33Q99PP7 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC13.1□□□□□ -0.31
Trim33Q99PP7 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Trim33Q99PP7 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim33Q99PP7 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim33Q99PP7 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
Trim33Q99PP7 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim33Q99PP7 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trim33Q99PP7 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trim33Q99PP7 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trim33Q99PP7 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trim33Q99PP7 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trim33Q99PP7 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trim33Q99PP7 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC13.09□□□□□ -0.31
Trim33Q99PP7 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC13.09□□□□□ -0.31
Trim33Q99PP7 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trim33Q99PP7 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trim33Q99PP7 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trim33Q99PP7 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trim33Q99PP7 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trim33Q99PP7 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trim33Q99PP7 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC13.09□□□□□ -0.31
Trim33Q99PP7 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trim33Q99PP7 Gm28911-201ENSMUST00000188837 117 ntBASIC13.09□□□□□ -0.31
Trim33Q99PP7 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC13.09□□□□□ -0.31
Trim33Q99PP7 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trim33Q99PP7 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trim33Q99PP7 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trim33Q99PP7 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trim33Q99PP7 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Trim33Q99PP7 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trim33Q99PP7 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trim33Q99PP7 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trim33Q99PP7 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Trim33Q99PP7 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trim33Q99PP7 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC13.09□□□□□ -0.31
Trim33Q99PP7 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trim33Q99PP7 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Trim33Q99PP7 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trim33Q99PP7 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trim33Q99PP7 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Trim33Q99PP7 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
Trim33Q99PP7 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trim33Q99PP7 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trim33Q99PP7 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trim33Q99PP7 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trim33Q99PP7 Gm37105-201ENSMUST00000192251 2085 ntBASIC13.08□□□□□ -0.32
Trim33Q99PP7 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trim33Q99PP7 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC13.08□□□□□ -0.32
Trim33Q99PP7 Gm12490-201ENSMUST00000120255 560 ntBASIC13.08□□□□□ -0.32
Trim33Q99PP7 Gm12138-201ENSMUST00000122180 951 ntBASIC13.08□□□□□ -0.32
Trim33Q99PP7 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC13.08□□□□□ -0.32
Trim33Q99PP7 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC13.08□□□□□ -0.32
Trim33Q99PP7 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trim33Q99PP7 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trim33Q99PP7 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC13.08□□□□□ -0.32
Trim33Q99PP7 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trim33Q99PP7 Gm2495-201ENSMUST00000191160 466 ntBASIC13.08□□□□□ -0.32
Trim33Q99PP7 Ighv5-13-201ENSMUST00000193550 290 ntBASIC13.08□□□□□ -0.32
Trim33Q99PP7 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC13.08□□□□□ -0.32
Trim33Q99PP7 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trim33Q99PP7 AC154595.3-201ENSMUST00000224579 384 ntBASIC13.08□□□□□ -0.32
Trim33Q99PP7 AC125117.2-201ENSMUST00000228344 1140 ntBASIC13.08□□□□□ -0.32
Trim33Q99PP7 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trim33Q99PP7 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trim33Q99PP7 Cox17-201ENSMUST00000050273 444 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trim33Q99PP7 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trim33Q99PP7 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Trim33Q99PP7 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trim33Q99PP7 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trim33Q99PP7 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trim33Q99PP7 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trim33Q99PP7 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trim33Q99PP7 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC13.08□□□□□ -0.32
Trim33Q99PP7 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trim33Q99PP7 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trim33Q99PP7 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trim33Q99PP7 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trim33Q99PP7 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC13.08□□□□□ -0.32
Trim33Q99PP7 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trim33Q99PP7 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trim33Q99PP7 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Trim33Q99PP7 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trim33Q99PP7 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim33Q99PP7 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC13.07□□□□□ -0.32
Trim33Q99PP7 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC13.07□□□□□ -0.32
Trim33Q99PP7 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC13.07□□□□□ -0.32
Trim33Q99PP7 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Trim33Q99PP7 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trim33Q99PP7 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim33Q99PP7 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim33Q99PP7 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 44.1 ms