Protein–RNA interactions for Protein: Q99PP6

Trim34a, Tripartite motif-containing protein 34A, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim34aQ99PP6 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trim34aQ99PP6 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
Trim34aQ99PP6 Gm10729-202ENSMUST00000193403 1375 ntBASIC16.15■□□□□ 0.18
Trim34aQ99PP6 CT009713.10-201ENSMUST00000225013 1986 ntBASIC16.15■□□□□ 0.18
Trim34aQ99PP6 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trim34aQ99PP6 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trim34aQ99PP6 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC16.15■□□□□ 0.18
Trim34aQ99PP6 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trim34aQ99PP6 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trim34aQ99PP6 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trim34aQ99PP6 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trim34aQ99PP6 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC16.15■□□□□ 0.18
Trim34aQ99PP6 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC16.15■□□□□ 0.18
Trim34aQ99PP6 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Trim34aQ99PP6 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trim34aQ99PP6 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trim34aQ99PP6 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Trim34aQ99PP6 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Trim34aQ99PP6 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Trim34aQ99PP6 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trim34aQ99PP6 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Trim34aQ99PP6 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC16.15■□□□□ 0.18
Trim34aQ99PP6 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Trim34aQ99PP6 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trim34aQ99PP6 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC16.14■□□□□ 0.17
Trim34aQ99PP6 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trim34aQ99PP6 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trim34aQ99PP6 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC16.14■□□□□ 0.17
Trim34aQ99PP6 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC16.14■□□□□ 0.17
Trim34aQ99PP6 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Trim34aQ99PP6 Gm12715-201ENSMUST00000121430 1128 ntBASIC16.14■□□□□ 0.17
Trim34aQ99PP6 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC16.14■□□□□ 0.17
Trim34aQ99PP6 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Trim34aQ99PP6 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC16.14■□□□□ 0.17
Trim34aQ99PP6 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC16.14■□□□□ 0.17
Trim34aQ99PP6 Gm43416-201ENSMUST00000201916 1015 ntBASIC16.14■□□□□ 0.17
Trim34aQ99PP6 Gm44772-201ENSMUST00000207623 1191 ntBASIC16.14■□□□□ 0.17
Trim34aQ99PP6 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC16.14■□□□□ 0.17
Trim34aQ99PP6 Gm5363-201ENSMUST00000211927 938 ntBASIC16.14■□□□□ 0.17
Trim34aQ99PP6 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trim34aQ99PP6 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Trim34aQ99PP6 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trim34aQ99PP6 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC16.14■□□□□ 0.17
Trim34aQ99PP6 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trim34aQ99PP6 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trim34aQ99PP6 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC16.14■□□□□ 0.17
Trim34aQ99PP6 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC16.14■□□□□ 0.17
Trim34aQ99PP6 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trim34aQ99PP6 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trim34aQ99PP6 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trim34aQ99PP6 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trim34aQ99PP6 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Trim34aQ99PP6 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trim34aQ99PP6 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Trim34aQ99PP6 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trim34aQ99PP6 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trim34aQ99PP6 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trim34aQ99PP6 AC139054.1-201ENSMUST00000226898 1598 ntBASIC16.13■□□□□ 0.17
Trim34aQ99PP6 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trim34aQ99PP6 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Trim34aQ99PP6 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Trim34aQ99PP6 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trim34aQ99PP6 Gm8228-201ENSMUST00000189949 2192 ntBASIC16.13■□□□□ 0.17
Trim34aQ99PP6 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trim34aQ99PP6 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Trim34aQ99PP6 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trim34aQ99PP6 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
Trim34aQ99PP6 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trim34aQ99PP6 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trim34aQ99PP6 Gm24830-201ENSMUST00000102024 166 ntBASIC16.13■□□□□ 0.17
Trim34aQ99PP6 Gm25890-201ENSMUST00000177643 165 ntBASIC16.13■□□□□ 0.17
Trim34aQ99PP6 Rnu1b2-201ENSMUST00000178073 165 ntBASIC16.13■□□□□ 0.17
Trim34aQ99PP6 Rnu1b1-201ENSMUST00000178250 165 ntBASIC16.13■□□□□ 0.17
Trim34aQ99PP6 Gm22614-201ENSMUST00000178300 165 ntBASIC16.13■□□□□ 0.17
Trim34aQ99PP6 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC16.13■□□□□ 0.17
Trim34aQ99PP6 Gm9061-201ENSMUST00000182707 1006 ntBASIC16.13■□□□□ 0.17
Trim34aQ99PP6 Mir7221-201ENSMUST00000184009 72 ntBASIC16.13■□□□□ 0.17
Trim34aQ99PP6 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC16.13■□□□□ 0.17
Trim34aQ99PP6 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC16.13■□□□□ 0.17
Trim34aQ99PP6 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC16.13■□□□□ 0.17
Trim34aQ99PP6 Gm22042-201ENSMUST00000082989 165 ntBASIC16.13■□□□□ 0.17
Trim34aQ99PP6 Gm26232-201ENSMUST00000083360 166 ntBASIC16.13■□□□□ 0.17
Trim34aQ99PP6 Gm24136-201ENSMUST00000083374 165 ntBASIC16.13■□□□□ 0.17
Trim34aQ99PP6 Rnu1b6-201ENSMUST00000083839 166 ntBASIC16.13■□□□□ 0.17
Trim34aQ99PP6 Gm26110-201ENSMUST00000083971 165 ntBASIC16.13■□□□□ 0.17
Trim34aQ99PP6 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trim34aQ99PP6 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC16.13■□□□□ 0.17
Trim34aQ99PP6 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Trim34aQ99PP6 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trim34aQ99PP6 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trim34aQ99PP6 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trim34aQ99PP6 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trim34aQ99PP6 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC16.13■□□□□ 0.17
Trim34aQ99PP6 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trim34aQ99PP6 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trim34aQ99PP6 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trim34aQ99PP6 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trim34aQ99PP6 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trim34aQ99PP6 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trim34aQ99PP6 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms