Protein–RNA interactions for Protein: Q99NI3

Gtf2ird2, General transcription factor II-I repeat domain-containing protein 2, mousemouse

Predictions only

Length 936 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf2ird2Q99NI3 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Gtf2ird2Q99NI3 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Gtf2ird2Q99NI3 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Gtf2ird2Q99NI3 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Gtf2ird2Q99NI3 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC13.53□□□□□ -0.24
Gtf2ird2Q99NI3 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Gtf2ird2Q99NI3 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Gtf2ird2Q99NI3 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Gtf2ird2Q99NI3 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Gtf2ird2Q99NI3 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Gtf2ird2Q99NI3 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Gtf2ird2Q99NI3 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC13.53□□□□□ -0.24
Gtf2ird2Q99NI3 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC13.53□□□□□ -0.24
Gtf2ird2Q99NI3 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Gtf2ird2Q99NI3 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Gtf2ird2Q99NI3 Snora78-201ENSMUST00000158630 128 ntBASIC13.53□□□□□ -0.24
Gtf2ird2Q99NI3 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC13.53□□□□□ -0.24
Gtf2ird2Q99NI3 Mir7085-201ENSMUST00000184353 66 ntBASIC13.53□□□□□ -0.24
Gtf2ird2Q99NI3 AY702102-202ENSMUST00000194651 1173 ntBASIC13.53□□□□□ -0.24
Gtf2ird2Q99NI3 Gm43818-201ENSMUST00000200605 466 ntBASIC13.53□□□□□ -0.24
Gtf2ird2Q99NI3 AC122305.4-201ENSMUST00000216159 1206 ntBASIC13.53□□□□□ -0.24
Gtf2ird2Q99NI3 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC13.53□□□□□ -0.24
Gtf2ird2Q99NI3 AC122459.1-201ENSMUST00000228373 885 ntBASIC13.53□□□□□ -0.24
Gtf2ird2Q99NI3 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Gtf2ird2Q99NI3 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC13.53□□□□□ -0.24
Gtf2ird2Q99NI3 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Gtf2ird2Q99NI3 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Gtf2ird2Q99NI3 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Gtf2ird2Q99NI3 Tmed9-203ENSMUST00000224741 1450 ntBASIC13.53□□□□□ -0.24
Gtf2ird2Q99NI3 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Gtf2ird2Q99NI3 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Gtf2ird2Q99NI3 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC13.53□□□□□ -0.24
Gtf2ird2Q99NI3 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Gtf2ird2Q99NI3 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Gtf2ird2Q99NI3 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Gtf2ird2Q99NI3 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Gtf2ird2Q99NI3 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Gtf2ird2Q99NI3 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Gtf2ird2Q99NI3 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
Gtf2ird2Q99NI3 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC13.52□□□□□ -0.24
Gtf2ird2Q99NI3 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Gtf2ird2Q99NI3 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Gtf2ird2Q99NI3 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC13.52□□□□□ -0.24
Gtf2ird2Q99NI3 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Gtf2ird2Q99NI3 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Gtf2ird2Q99NI3 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC13.52□□□□□ -0.25
Gtf2ird2Q99NI3 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Gtf2ird2Q99NI3 Gm14660-201ENSMUST00000119809 575 ntBASIC13.52□□□□□ -0.25
Gtf2ird2Q99NI3 Gm27731-201ENSMUST00000185192 107 ntBASIC13.52□□□□□ -0.25
Gtf2ird2Q99NI3 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC13.52□□□□□ -0.25
Gtf2ird2Q99NI3 Gm37497-201ENSMUST00000195830 798 ntBASIC13.52□□□□□ -0.25
Gtf2ird2Q99NI3 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC13.52□□□□□ -0.25
Gtf2ird2Q99NI3 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Gtf2ird2Q99NI3 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC13.52□□□□□ -0.25
Gtf2ird2Q99NI3 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Gtf2ird2Q99NI3 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Gtf2ird2Q99NI3 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
Gtf2ird2Q99NI3 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Gtf2ird2Q99NI3 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Gtf2ird2Q99NI3 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Gtf2ird2Q99NI3 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Gtf2ird2Q99NI3 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Gtf2ird2Q99NI3 Gm7002-201ENSMUST00000221386 2165 ntBASIC13.52□□□□□ -0.25
Gtf2ird2Q99NI3 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Gtf2ird2Q99NI3 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Gtf2ird2Q99NI3 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Gtf2ird2Q99NI3 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Gtf2ird2Q99NI3 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Gtf2ird2Q99NI3 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC13.51□□□□□ -0.25
Gtf2ird2Q99NI3 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Gtf2ird2Q99NI3 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Gtf2ird2Q99NI3 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Gtf2ird2Q99NI3 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Gtf2ird2Q99NI3 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC13.51□□□□□ -0.25
Gtf2ird2Q99NI3 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC13.51□□□□□ -0.25
Gtf2ird2Q99NI3 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC13.51□□□□□ -0.25
Gtf2ird2Q99NI3 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC13.51□□□□□ -0.25
Gtf2ird2Q99NI3 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Gtf2ird2Q99NI3 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Gtf2ird2Q99NI3 Gm45684-201ENSMUST00000210244 1571 ntBASIC13.51□□□□□ -0.25
Gtf2ird2Q99NI3 Gm7553-201ENSMUST00000185805 1426 ntBASIC13.51□□□□□ -0.25
Gtf2ird2Q99NI3 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Gtf2ird2Q99NI3 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Gtf2ird2Q99NI3 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Gtf2ird2Q99NI3 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Gtf2ird2Q99NI3 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC13.51□□□□□ -0.25
Gtf2ird2Q99NI3 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Gtf2ird2Q99NI3 Gm12384-201ENSMUST00000119228 919 ntBASIC13.51□□□□□ -0.25
Gtf2ird2Q99NI3 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC13.51□□□□□ -0.25
Gtf2ird2Q99NI3 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC13.51□□□□□ -0.25
Gtf2ird2Q99NI3 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Gtf2ird2Q99NI3 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC13.51□□□□□ -0.25
Gtf2ird2Q99NI3 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Gtf2ird2Q99NI3 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC13.51□□□□□ -0.25
Gtf2ird2Q99NI3 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Gtf2ird2Q99NI3 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC13.51□□□□□ -0.25
Gtf2ird2Q99NI3 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Gtf2ird2Q99NI3 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC13.51□□□□□ -0.25
Gtf2ird2Q99NI3 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Gtf2ird2Q99NI3 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 50.7 ms