Protein–RNA interactions for Protein: Q99MQ5

Col25a1, Collagen alpha-1(XXV) chain, mousemouse

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col25a1Q99MQ5 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Col25a1Q99MQ5 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC13.61□□□□□ -0.23
Col25a1Q99MQ5 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Col25a1Q99MQ5 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Col25a1Q99MQ5 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC13.61□□□□□ -0.23
Col25a1Q99MQ5 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Col25a1Q99MQ5 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Col25a1Q99MQ5 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Col25a1Q99MQ5 Apoo-202ENSMUST00000113896 1032 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Col25a1Q99MQ5 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC13.61□□□□□ -0.23
Col25a1Q99MQ5 Gm15432-201ENSMUST00000121106 195 ntBASIC13.61□□□□□ -0.23
Col25a1Q99MQ5 Gm13123-201ENSMUST00000122173 492 ntBASIC13.61□□□□□ -0.23
Col25a1Q99MQ5 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC13.61□□□□□ -0.23
Col25a1Q99MQ5 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Col25a1Q99MQ5 Gm27046-201ENSMUST00000182160 463 ntBASIC13.61□□□□□ -0.23
Col25a1Q99MQ5 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Col25a1Q99MQ5 2310074N15Rik-201ENSMUST00000198276 582 ntBASIC13.61□□□□□ -0.23
Col25a1Q99MQ5 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC13.61□□□□□ -0.23
Col25a1Q99MQ5 AC166992.1-201ENSMUST00000216356 565 ntBASIC13.61□□□□□ -0.23
Col25a1Q99MQ5 AC134254.1-201ENSMUST00000221362 167 ntBASIC13.61□□□□□ -0.23
Col25a1Q99MQ5 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Col25a1Q99MQ5 Gm24447-201ENSMUST00000083977 338 ntBASIC13.61□□□□□ -0.23
Col25a1Q99MQ5 Gm7551-201ENSMUST00000089593 1074 ntBASIC13.61□□□□□ -0.23
Col25a1Q99MQ5 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC13.61□□□□□ -0.23
Col25a1Q99MQ5 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Col25a1Q99MQ5 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Col25a1Q99MQ5 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Col25a1Q99MQ5 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Col25a1Q99MQ5 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Col25a1Q99MQ5 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Col25a1Q99MQ5 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Col25a1Q99MQ5 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Col25a1Q99MQ5 Rab30-202ENSMUST00000107179 1304 ntTSL 5 BASIC13.61□□□□□ -0.23
Col25a1Q99MQ5 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC13.61□□□□□ -0.23
Col25a1Q99MQ5 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Col25a1Q99MQ5 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Col25a1Q99MQ5 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Col25a1Q99MQ5 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Col25a1Q99MQ5 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Col25a1Q99MQ5 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Col25a1Q99MQ5 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Col25a1Q99MQ5 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Col25a1Q99MQ5 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Col25a1Q99MQ5 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC13.6□□□□□ -0.23
Col25a1Q99MQ5 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Col25a1Q99MQ5 Pex3-207ENSMUST00000170376 1381 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Col25a1Q99MQ5 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Col25a1Q99MQ5 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Col25a1Q99MQ5 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Col25a1Q99MQ5 Gm12969-201ENSMUST00000120199 1004 ntBASIC13.6□□□□□ -0.23
Col25a1Q99MQ5 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC13.6□□□□□ -0.23
Col25a1Q99MQ5 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Col25a1Q99MQ5 Gm6159-201ENSMUST00000191249 1724 ntBASIC13.6□□□□□ -0.23
Col25a1Q99MQ5 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC13.6□□□□□ -0.23
Col25a1Q99MQ5 Gm19287-201ENSMUST00000203190 358 ntBASIC13.6□□□□□ -0.23
Col25a1Q99MQ5 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
Col25a1Q99MQ5 Gm44552-201ENSMUST00000205458 1247 ntBASIC13.6□□□□□ -0.23
Col25a1Q99MQ5 AC073947.2-201ENSMUST00000215888 1130 ntBASIC13.6□□□□□ -0.23
Col25a1Q99MQ5 Dhrs4-202ENSMUST00000226168 828 ntBASIC13.6□□□□□ -0.23
Col25a1Q99MQ5 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Col25a1Q99MQ5 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Col25a1Q99MQ5 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Col25a1Q99MQ5 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Col25a1Q99MQ5 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Col25a1Q99MQ5 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Col25a1Q99MQ5 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Col25a1Q99MQ5 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Col25a1Q99MQ5 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Col25a1Q99MQ5 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Col25a1Q99MQ5 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Col25a1Q99MQ5 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC13.59□□□□□ -0.23
Col25a1Q99MQ5 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC13.59□□□□□ -0.23
Col25a1Q99MQ5 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Col25a1Q99MQ5 Gm15544-201ENSMUST00000118776 1531 ntBASIC13.59□□□□□ -0.23
Col25a1Q99MQ5 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Col25a1Q99MQ5 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Col25a1Q99MQ5 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Col25a1Q99MQ5 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC13.59□□□□□ -0.23
Col25a1Q99MQ5 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Col25a1Q99MQ5 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Col25a1Q99MQ5 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Col25a1Q99MQ5 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC13.59□□□□□ -0.23
Col25a1Q99MQ5 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Col25a1Q99MQ5 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Col25a1Q99MQ5 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC13.59□□□□□ -0.23
Col25a1Q99MQ5 B230119M05Rik-201ENSMUST00000154072 979 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Col25a1Q99MQ5 Gm17040-202ENSMUST00000170597 889 ntBASIC13.59□□□□□ -0.23
Col25a1Q99MQ5 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC13.59□□□□□ -0.23
Col25a1Q99MQ5 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Col25a1Q99MQ5 Gm34908-201ENSMUST00000207222 569 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Col25a1Q99MQ5 Gm19963-201ENSMUST00000208413 1255 ntBASIC13.59□□□□□ -0.23
Col25a1Q99MQ5 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Col25a1Q99MQ5 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Col25a1Q99MQ5 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Col25a1Q99MQ5 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Col25a1Q99MQ5 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Col25a1Q99MQ5 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
Col25a1Q99MQ5 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC13.59□□□□□ -0.23
Col25a1Q99MQ5 Gm19863-201ENSMUST00000192480 2218 ntBASIC13.59□□□□□ -0.23
Col25a1Q99MQ5 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 52.7 ms