Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Nkx6-1Q99MA9 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Nkx6-1Q99MA9 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Nkx6-1Q99MA9 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Nkx6-1Q99MA9 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Nkx6-1Q99MA9 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Nkx6-1Q99MA9 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Nkx6-1Q99MA9 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
Nkx6-1Q99MA9 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.43
Nkx6-1Q99MA9 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
Nkx6-1Q99MA9 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC12.33□□□□□ -0.44
Nkx6-1Q99MA9 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nkx6-1Q99MA9 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Nkx6-1Q99MA9 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nkx6-1Q99MA9 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC12.33□□□□□ -0.44
Nkx6-1Q99MA9 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nkx6-1Q99MA9 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nkx6-1Q99MA9 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nkx6-1Q99MA9 Bnip3l-ps-201ENSMUST00000101577 657 ntBASIC12.33□□□□□ -0.44
Nkx6-1Q99MA9 Pmp22-203ENSMUST00000108701 723 ntAPPRIS P1 TSL 3 BASIC12.33□□□□□ -0.44
Nkx6-1Q99MA9 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC12.33□□□□□ -0.44
Nkx6-1Q99MA9 Gm7857-201ENSMUST00000117957 358 ntBASIC12.33□□□□□ -0.44
Nkx6-1Q99MA9 1700084C06Rik-201ENSMUST00000135674 750 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Nkx6-1Q99MA9 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC12.33□□□□□ -0.44
Nkx6-1Q99MA9 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nkx6-1Q99MA9 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Nkx6-1Q99MA9 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC12.33□□□□□ -0.44
Nkx6-1Q99MA9 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nkx6-1Q99MA9 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC12.33□□□□□ -0.44
Nkx6-1Q99MA9 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Nkx6-1Q99MA9 Gm6458-201ENSMUST00000211573 635 ntBASIC12.33□□□□□ -0.44
Nkx6-1Q99MA9 Bnip3l-ps-202ENSMUST00000220709 1132 ntBASIC12.33□□□□□ -0.44
Nkx6-1Q99MA9 AC069562.3-201ENSMUST00000225387 587 ntBASIC12.33□□□□□ -0.44
Nkx6-1Q99MA9 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nkx6-1Q99MA9 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Nkx6-1Q99MA9 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nkx6-1Q99MA9 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC12.33□□□□□ -0.44
Nkx6-1Q99MA9 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nkx6-1Q99MA9 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nkx6-1Q99MA9 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Nkx6-1Q99MA9 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC12.33□□□□□ -0.44
Nkx6-1Q99MA9 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Nkx6-1Q99MA9 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Nkx6-1Q99MA9 Cyp4f16-208ENSMUST00000169591 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nkx6-1Q99MA9 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nkx6-1Q99MA9 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nkx6-1Q99MA9 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nkx6-1Q99MA9 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nkx6-1Q99MA9 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nkx6-1Q99MA9 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nkx6-1Q99MA9 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nkx6-1Q99MA9 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nkx6-1Q99MA9 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nkx6-1Q99MA9 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Nkx6-1Q99MA9 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Nkx6-1Q99MA9 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nkx6-1Q99MA9 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nkx6-1Q99MA9 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nkx6-1Q99MA9 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nkx6-1Q99MA9 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nkx6-1Q99MA9 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Nkx6-1Q99MA9 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nkx6-1Q99MA9 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nkx6-1Q99MA9 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Nkx6-1Q99MA9 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nkx6-1Q99MA9 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nkx6-1Q99MA9 Lamr1-ps1-201ENSMUST00000119759 874 ntBASIC12.32□□□□□ -0.44
Nkx6-1Q99MA9 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nkx6-1Q99MA9 Gm19891-201ENSMUST00000189771 303 ntBASIC12.32□□□□□ -0.44
Nkx6-1Q99MA9 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC12.32□□□□□ -0.44
Nkx6-1Q99MA9 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nkx6-1Q99MA9 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Nkx6-1Q99MA9 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Nkx6-1Q99MA9 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nkx6-1Q99MA9 Slamf7-204ENSMUST00000194531 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nkx6-1Q99MA9 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nkx6-1Q99MA9 Gm19221-201ENSMUST00000221827 1477 ntBASIC12.32□□□□□ -0.44
Nkx6-1Q99MA9 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nkx6-1Q99MA9 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Nkx6-1Q99MA9 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nkx6-1Q99MA9 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nkx6-1Q99MA9 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Nkx6-1Q99MA9 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Nkx6-1Q99MA9 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Nkx6-1Q99MA9 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nkx6-1Q99MA9 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC12.32□□□□□ -0.44
Nkx6-1Q99MA9 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nkx6-1Q99MA9 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Nkx6-1Q99MA9 Gm37691-201ENSMUST00000192147 2573 ntBASIC12.31□□□□□ -0.44
Nkx6-1Q99MA9 Gm9856-201ENSMUST00000217077 2578 ntBASIC12.31□□□□□ -0.44
Nkx6-1Q99MA9 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nkx6-1Q99MA9 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nkx6-1Q99MA9 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nkx6-1Q99MA9 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nkx6-1Q99MA9 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nkx6-1Q99MA9 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Nkx6-1Q99MA9 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nkx6-1Q99MA9 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nkx6-1Q99MA9 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Nkx6-1Q99MA9 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 45.9 ms