Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Clp1Q99LI9 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Clp1Q99LI9 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Clp1Q99LI9 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Clp1Q99LI9 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Clp1Q99LI9 Atg10-201ENSMUST00000022119 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Clp1Q99LI9 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC13.81□□□□□ -0.2
Clp1Q99LI9 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC13.81□□□□□ -0.2
Clp1Q99LI9 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Clp1Q99LI9 Gm24514-201ENSMUST00000174961 285 ntBASIC13.81□□□□□ -0.2
Clp1Q99LI9 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC13.81□□□□□ -0.2
Clp1Q99LI9 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
Clp1Q99LI9 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC13.81□□□□□ -0.2
Clp1Q99LI9 Gm8712-201ENSMUST00000221090 701 ntBASIC13.81□□□□□ -0.2
Clp1Q99LI9 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Clp1Q99LI9 Ntan1-201ENSMUST00000023362 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Clp1Q99LI9 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Clp1Q99LI9 Rpl10a-201ENSMUST00000042334 829 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Clp1Q99LI9 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Clp1Q99LI9 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Clp1Q99LI9 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Clp1Q99LI9 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Clp1Q99LI9 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Clp1Q99LI9 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Clp1Q99LI9 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Clp1Q99LI9 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Clp1Q99LI9 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Clp1Q99LI9 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC13.8□□□□□ -0.2
Clp1Q99LI9 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC13.8□□□□□ -0.2
Clp1Q99LI9 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Clp1Q99LI9 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Clp1Q99LI9 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC13.8□□□□□ -0.2
Clp1Q99LI9 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Clp1Q99LI9 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Clp1Q99LI9 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Clp1Q99LI9 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Clp1Q99LI9 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Clp1Q99LI9 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Clp1Q99LI9 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC13.8□□□□□ -0.2
Clp1Q99LI9 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Clp1Q99LI9 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Clp1Q99LI9 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC13.8□□□□□ -0.2
Clp1Q99LI9 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Clp1Q99LI9 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC13.8□□□□□ -0.2
Clp1Q99LI9 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Clp1Q99LI9 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC13.8□□□□□ -0.2
Clp1Q99LI9 Gm25043-201ENSMUST00000158604 212 ntBASIC13.8□□□□□ -0.2
Clp1Q99LI9 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC13.8□□□□□ -0.2
Clp1Q99LI9 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC13.8□□□□□ -0.2
Clp1Q99LI9 Gm9061-201ENSMUST00000182707 1006 ntBASIC13.8□□□□□ -0.2
Clp1Q99LI9 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Clp1Q99LI9 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Clp1Q99LI9 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Clp1Q99LI9 Gm22058-201ENSMUST00000083393 310 ntBASIC13.8□□□□□ -0.2
Clp1Q99LI9 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Clp1Q99LI9 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC13.8□□□□□ -0.2
Clp1Q99LI9 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Clp1Q99LI9 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Clp1Q99LI9 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
Clp1Q99LI9 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Clp1Q99LI9 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Clp1Q99LI9 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Clp1Q99LI9 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Clp1Q99LI9 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Clp1Q99LI9 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC13.8□□□□□ -0.2
Clp1Q99LI9 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Clp1Q99LI9 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Clp1Q99LI9 Sun1-203ENSMUST00000100517 1522 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Clp1Q99LI9 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC13.79□□□□□ -0.2
Clp1Q99LI9 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Clp1Q99LI9 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Clp1Q99LI9 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Clp1Q99LI9 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Clp1Q99LI9 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Clp1Q99LI9 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Clp1Q99LI9 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Clp1Q99LI9 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Clp1Q99LI9 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Clp1Q99LI9 Gm6754-201ENSMUST00000117124 913 ntBASIC13.79□□□□□ -0.2
Clp1Q99LI9 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Clp1Q99LI9 Gm14662-201ENSMUST00000145552 734 ntTSL 3 BASIC13.79□□□□□ -0.2
Clp1Q99LI9 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Clp1Q99LI9 AC166095.1-201ENSMUST00000223731 1241 ntBASIC13.79□□□□□ -0.2
Clp1Q99LI9 AC113031.8-201ENSMUST00000227856 631 ntBASIC13.79□□□□□ -0.2
Clp1Q99LI9 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Clp1Q99LI9 Gm37133-201ENSMUST00000192705 1922 ntBASIC13.79□□□□□ -0.2
Clp1Q99LI9 Gm43697-201ENSMUST00000199637 2581 ntBASIC13.79□□□□□ -0.2
Clp1Q99LI9 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Clp1Q99LI9 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Clp1Q99LI9 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Clp1Q99LI9 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Clp1Q99LI9 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC13.79□□□□□ -0.2
Clp1Q99LI9 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Clp1Q99LI9 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Clp1Q99LI9 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Clp1Q99LI9 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Clp1Q99LI9 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Clp1Q99LI9 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Clp1Q99LI9 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC13.78□□□□□ -0.2
Clp1Q99LI9 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 84.7 ms