Protein–RNA interactions for Protein: Q99KU0

Vmp1, Vacuole membrane protein 1, mousemouse

Predictions only

Length 406 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmp1Q99KU0 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Vmp1Q99KU0 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC12.72□□□□□ -0.37
Vmp1Q99KU0 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Vmp1Q99KU0 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Vmp1Q99KU0 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Vmp1Q99KU0 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Vmp1Q99KU0 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC12.72□□□□□ -0.37
Vmp1Q99KU0 Gm14928-201ENSMUST00000120198 477 ntBASIC12.72□□□□□ -0.37
Vmp1Q99KU0 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC12.72□□□□□ -0.37
Vmp1Q99KU0 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC12.72□□□□□ -0.37
Vmp1Q99KU0 Gm12091-201ENSMUST00000146791 830 ntBASIC12.72□□□□□ -0.37
Vmp1Q99KU0 Ighv5-13-201ENSMUST00000193550 290 ntBASIC12.72□□□□□ -0.37
Vmp1Q99KU0 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Vmp1Q99KU0 AC140375.2-201ENSMUST00000225283 584 ntBASIC12.72□□□□□ -0.37
Vmp1Q99KU0 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vmp1Q99KU0 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vmp1Q99KU0 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Vmp1Q99KU0 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Vmp1Q99KU0 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Vmp1Q99KU0 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vmp1Q99KU0 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vmp1Q99KU0 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC12.72□□□□□ -0.37
Vmp1Q99KU0 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Vmp1Q99KU0 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vmp1Q99KU0 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC12.72□□□□□ -0.37
Vmp1Q99KU0 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Vmp1Q99KU0 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Vmp1Q99KU0 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Vmp1Q99KU0 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC12.72□□□□□ -0.37
Vmp1Q99KU0 Gm37015-201ENSMUST00000192763 1521 ntBASIC12.72□□□□□ -0.37
Vmp1Q99KU0 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Vmp1Q99KU0 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Vmp1Q99KU0 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vmp1Q99KU0 Gm10652-201ENSMUST00000199790 2622 ntBASIC12.72□□□□□ -0.37
Vmp1Q99KU0 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vmp1Q99KU0 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Vmp1Q99KU0 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Vmp1Q99KU0 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC12.71□□□□□ -0.37
Vmp1Q99KU0 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Vmp1Q99KU0 Gm10686-201ENSMUST00000215389 3247 ntBASIC12.71□□□□□ -0.37
Vmp1Q99KU0 Gm13859-201ENSMUST00000119936 1423 ntBASIC12.71□□□□□ -0.37
Vmp1Q99KU0 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Vmp1Q99KU0 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Vmp1Q99KU0 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Vmp1Q99KU0 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Vmp1Q99KU0 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Vmp1Q99KU0 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Vmp1Q99KU0 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Vmp1Q99KU0 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Vmp1Q99KU0 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Vmp1Q99KU0 AC168058.1-201ENSMUST00000219521 2282 ntBASIC12.71□□□□□ -0.37
Vmp1Q99KU0 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Vmp1Q99KU0 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Vmp1Q99KU0 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Vmp1Q99KU0 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Vmp1Q99KU0 Gm12341-201ENSMUST00000119724 503 ntBASIC12.71□□□□□ -0.37
Vmp1Q99KU0 Gm23984-201ENSMUST00000157139 203 ntBASIC12.71□□□□□ -0.37
Vmp1Q99KU0 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC12.71□□□□□ -0.37
Vmp1Q99KU0 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Vmp1Q99KU0 Gm9794-201ENSMUST00000202370 423 ntBASIC12.71□□□□□ -0.37
Vmp1Q99KU0 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Vmp1Q99KU0 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Vmp1Q99KU0 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC12.71□□□□□ -0.37
Vmp1Q99KU0 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Vmp1Q99KU0 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Vmp1Q99KU0 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Vmp1Q99KU0 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Vmp1Q99KU0 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Vmp1Q99KU0 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Vmp1Q99KU0 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Vmp1Q99KU0 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Vmp1Q99KU0 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Vmp1Q99KU0 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
Vmp1Q99KU0 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Vmp1Q99KU0 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Vmp1Q99KU0 Gm37324-201ENSMUST00000194500 4504 ntBASIC12.71□□□□□ -0.38
Vmp1Q99KU0 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Vmp1Q99KU0 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Vmp1Q99KU0 Gm42480-201ENSMUST00000198434 2595 ntBASIC12.71□□□□□ -0.38
Vmp1Q99KU0 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Vmp1Q99KU0 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Vmp1Q99KU0 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Vmp1Q99KU0 Gm42706-201ENSMUST00000199733 1910 ntBASIC12.7□□□□□ -0.38
Vmp1Q99KU0 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Vmp1Q99KU0 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Vmp1Q99KU0 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Vmp1Q99KU0 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Vmp1Q99KU0 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Vmp1Q99KU0 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Vmp1Q99KU0 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC12.7□□□□□ -0.38
Vmp1Q99KU0 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Vmp1Q99KU0 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Vmp1Q99KU0 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Vmp1Q99KU0 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Vmp1Q99KU0 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Vmp1Q99KU0 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Vmp1Q99KU0 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC12.7□□□□□ -0.38
Vmp1Q99KU0 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC12.7□□□□□ -0.38
Vmp1Q99KU0 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Vmp1Q99KU0 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC12.7□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 49.5 ms