Protein–RNA interactions for Protein: Q91Y09

Pcdhac2, Protocadherin alpha C2, mousemouse

Predictions only

Length 1,006 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhac2Q91Y09 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdhac2Q91Y09 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdhac2Q91Y09 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdhac2Q91Y09 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdhac2Q91Y09 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdhac2Q91Y09 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Pcdhac2Q91Y09 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdhac2Q91Y09 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Pcdhac2Q91Y09 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Pcdhac2Q91Y09 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.14
Pcdhac2Q91Y09 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Pcdhac2Q91Y09 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC14.21□□□□□ -0.14
Pcdhac2Q91Y09 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Pcdhac2Q91Y09 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhac2Q91Y09 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC14.2□□□□□ -0.14
Pcdhac2Q91Y09 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhac2Q91Y09 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Pcdhac2Q91Y09 Gm4366-201ENSMUST00000201488 1342 ntBASIC14.2□□□□□ -0.14
Pcdhac2Q91Y09 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhac2Q91Y09 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhac2Q91Y09 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhac2Q91Y09 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC14.2□□□□□ -0.14
Pcdhac2Q91Y09 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhac2Q91Y09 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhac2Q91Y09 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC14.2□□□□□ -0.14
Pcdhac2Q91Y09 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhac2Q91Y09 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhac2Q91Y09 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhac2Q91Y09 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC14.2□□□□□ -0.14
Pcdhac2Q91Y09 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhac2Q91Y09 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Pcdhac2Q91Y09 Gm26956-201ENSMUST00000182176 986 ntBASIC14.2□□□□□ -0.14
Pcdhac2Q91Y09 Gm43068-201ENSMUST00000201095 1273 ntBASIC14.2□□□□□ -0.14
Pcdhac2Q91Y09 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhac2Q91Y09 Bet1l-207ENSMUST00000211527 298 ntTSL 5 BASIC14.2□□□□□ -0.14
Pcdhac2Q91Y09 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC14.2□□□□□ -0.14
Pcdhac2Q91Y09 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhac2Q91Y09 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC14.2□□□□□ -0.14
Pcdhac2Q91Y09 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC14.2□□□□□ -0.14
Pcdhac2Q91Y09 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhac2Q91Y09 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhac2Q91Y09 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Pcdhac2Q91Y09 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhac2Q91Y09 AC154725.1-201ENSMUST00000224826 1961 ntBASIC14.2□□□□□ -0.14
Pcdhac2Q91Y09 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhac2Q91Y09 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhac2Q91Y09 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC14.19□□□□□ -0.14
Pcdhac2Q91Y09 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhac2Q91Y09 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhac2Q91Y09 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Pcdhac2Q91Y09 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhac2Q91Y09 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Pcdhac2Q91Y09 Gm43134-201ENSMUST00000199434 1886 ntBASIC14.19□□□□□ -0.14
Pcdhac2Q91Y09 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhac2Q91Y09 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhac2Q91Y09 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhac2Q91Y09 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhac2Q91Y09 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhac2Q91Y09 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC14.19□□□□□ -0.14
Pcdhac2Q91Y09 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhac2Q91Y09 B9d1os-201ENSMUST00000137010 674 ntBASIC14.19□□□□□ -0.14
Pcdhac2Q91Y09 Gm13570-201ENSMUST00000140763 309 ntBASIC14.19□□□□□ -0.14
Pcdhac2Q91Y09 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhac2Q91Y09 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Pcdhac2Q91Y09 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC14.19□□□□□ -0.14
Pcdhac2Q91Y09 Gm2260-201ENSMUST00000184965 657 ntBASIC14.19□□□□□ -0.14
Pcdhac2Q91Y09 Gm38092-201ENSMUST00000195600 653 ntBASIC14.19□□□□□ -0.14
Pcdhac2Q91Y09 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC14.19□□□□□ -0.14
Pcdhac2Q91Y09 Gm9445-201ENSMUST00000207454 1285 ntBASIC14.19□□□□□ -0.14
Pcdhac2Q91Y09 Gm45339-201ENSMUST00000210823 877 ntTSL 5 BASIC14.19□□□□□ -0.14
Pcdhac2Q91Y09 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhac2Q91Y09 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhac2Q91Y09 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhac2Q91Y09 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC14.19□□□□□ -0.14
Pcdhac2Q91Y09 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhac2Q91Y09 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhac2Q91Y09 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhac2Q91Y09 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhac2Q91Y09 Gm14752-201ENSMUST00000120719 2075 ntBASIC14.19□□□□□ -0.14
Pcdhac2Q91Y09 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhac2Q91Y09 Daam2-202ENSMUST00000224595 1926 ntBASIC14.19□□□□□ -0.14
Pcdhac2Q91Y09 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhac2Q91Y09 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhac2Q91Y09 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhac2Q91Y09 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC14.19□□□□□ -0.14
Pcdhac2Q91Y09 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhac2Q91Y09 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC14.19□□□□□ -0.14
Pcdhac2Q91Y09 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Pcdhac2Q91Y09 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdhac2Q91Y09 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdhac2Q91Y09 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdhac2Q91Y09 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdhac2Q91Y09 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdhac2Q91Y09 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Pcdhac2Q91Y09 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdhac2Q91Y09 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdhac2Q91Y09 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdhac2Q91Y09 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdhac2Q91Y09 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdhac2Q91Y09 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 56.2 ms