Protein–RNA interactions for Protein: Q91XZ4

Pcdhb6, Protocadherin beta-6, mousemouse

Predictions only

Length 772 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb6Q91XZ4 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdhb6Q91XZ4 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC13.51□□□□□ -0.25
Pcdhb6Q91XZ4 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdhb6Q91XZ4 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdhb6Q91XZ4 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdhb6Q91XZ4 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdhb6Q91XZ4 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdhb6Q91XZ4 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdhb6Q91XZ4 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdhb6Q91XZ4 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdhb6Q91XZ4 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdhb6Q91XZ4 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdhb6Q91XZ4 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Pcdhb6Q91XZ4 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdhb6Q91XZ4 Gm43570-201ENSMUST00000199951 3688 ntBASIC13.5□□□□□ -0.25
Pcdhb6Q91XZ4 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdhb6Q91XZ4 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdhb6Q91XZ4 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdhb6Q91XZ4 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC13.5□□□□□ -0.25
Pcdhb6Q91XZ4 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdhb6Q91XZ4 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdhb6Q91XZ4 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdhb6Q91XZ4 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdhb6Q91XZ4 Proscos-202ENSMUST00000178990 666 ntBASIC13.5□□□□□ -0.25
Pcdhb6Q91XZ4 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC13.5□□□□□ -0.25
Pcdhb6Q91XZ4 Gm38297-201ENSMUST00000195122 1057 ntBASIC13.5□□□□□ -0.25
Pcdhb6Q91XZ4 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdhb6Q91XZ4 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC13.5□□□□□ -0.25
Pcdhb6Q91XZ4 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC13.5□□□□□ -0.25
Pcdhb6Q91XZ4 AC138604.1-201ENSMUST00000226969 739 ntBASIC13.5□□□□□ -0.25
Pcdhb6Q91XZ4 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdhb6Q91XZ4 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdhb6Q91XZ4 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Pcdhb6Q91XZ4 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdhb6Q91XZ4 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC13.5□□□□□ -0.25
Pcdhb6Q91XZ4 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdhb6Q91XZ4 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Pcdhb6Q91XZ4 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdhb6Q91XZ4 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdhb6Q91XZ4 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdhb6Q91XZ4 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdhb6Q91XZ4 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdhb6Q91XZ4 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdhb6Q91XZ4 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdhb6Q91XZ4 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdhb6Q91XZ4 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC13.5□□□□□ -0.25
Pcdhb6Q91XZ4 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC13.5□□□□□ -0.25
Pcdhb6Q91XZ4 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdhb6Q91XZ4 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdhb6Q91XZ4 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdhb6Q91XZ4 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdhb6Q91XZ4 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdhb6Q91XZ4 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdhb6Q91XZ4 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdhb6Q91XZ4 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdhb6Q91XZ4 AC101945.2-201ENSMUST00000227886 1377 ntBASIC13.49□□□□□ -0.25
Pcdhb6Q91XZ4 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC13.49□□□□□ -0.25
Pcdhb6Q91XZ4 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdhb6Q91XZ4 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdhb6Q91XZ4 Mir686-201ENSMUST00000102174 109 ntBASIC13.49□□□□□ -0.25
Pcdhb6Q91XZ4 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC13.49□□□□□ -0.25
Pcdhb6Q91XZ4 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC13.49□□□□□ -0.25
Pcdhb6Q91XZ4 Gm12138-201ENSMUST00000122180 951 ntBASIC13.49□□□□□ -0.25
Pcdhb6Q91XZ4 Gm10156-201ENSMUST00000122364 462 ntBASIC13.49□□□□□ -0.25
Pcdhb6Q91XZ4 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdhb6Q91XZ4 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdhb6Q91XZ4 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC13.49□□□□□ -0.25
Pcdhb6Q91XZ4 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdhb6Q91XZ4 Gm38671-201ENSMUST00000200573 130 ntBASIC13.49□□□□□ -0.25
Pcdhb6Q91XZ4 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC13.49□□□□□ -0.25
Pcdhb6Q91XZ4 AC110817.1-201ENSMUST00000225706 605 ntBASIC13.49□□□□□ -0.25
Pcdhb6Q91XZ4 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdhb6Q91XZ4 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdhb6Q91XZ4 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Pcdhb6Q91XZ4 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdhb6Q91XZ4 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdhb6Q91XZ4 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdhb6Q91XZ4 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC13.49□□□□□ -0.25
Pcdhb6Q91XZ4 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdhb6Q91XZ4 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdhb6Q91XZ4 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC13.49□□□□□ -0.25
Pcdhb6Q91XZ4 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC13.49□□□□□ -0.25
Pcdhb6Q91XZ4 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdhb6Q91XZ4 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdhb6Q91XZ4 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdhb6Q91XZ4 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdhb6Q91XZ4 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdhb6Q91XZ4 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Pcdhb6Q91XZ4 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Pcdhb6Q91XZ4 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdhb6Q91XZ4 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdhb6Q91XZ4 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Pcdhb6Q91XZ4 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdhb6Q91XZ4 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdhb6Q91XZ4 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC13.48□□□□□ -0.25
Pcdhb6Q91XZ4 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Pcdhb6Q91XZ4 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdhb6Q91XZ4 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC13.48□□□□□ -0.25
Pcdhb6Q91XZ4 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdhb6Q91XZ4 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 53.4 ms