Protein–RNA interactions for Protein: Q91XY2

Pcdhga6, Protocadherin gamma A6, mousemouse

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga6Q91XY2 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhga6Q91XY2 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhga6Q91XY2 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhga6Q91XY2 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC13.13□□□□□ -0.31
Pcdhga6Q91XY2 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhga6Q91XY2 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhga6Q91XY2 Gm11400-201ENSMUST00000120853 1214 ntBASIC13.13□□□□□ -0.31
Pcdhga6Q91XY2 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhga6Q91XY2 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC13.13□□□□□ -0.31
Pcdhga6Q91XY2 Gm17376-201ENSMUST00000166016 84 ntBASIC13.13□□□□□ -0.31
Pcdhga6Q91XY2 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhga6Q91XY2 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhga6Q91XY2 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC13.13□□□□□ -0.31
Pcdhga6Q91XY2 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC13.13□□□□□ -0.31
Pcdhga6Q91XY2 Gm4935-201ENSMUST00000221316 1198 ntBASIC13.13□□□□□ -0.31
Pcdhga6Q91XY2 Psma7-201ENSMUST00000029082 914 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhga6Q91XY2 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhga6Q91XY2 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhga6Q91XY2 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhga6Q91XY2 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhga6Q91XY2 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhga6Q91XY2 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC13.13□□□□□ -0.31
Pcdhga6Q91XY2 Gm42829-201ENSMUST00000198417 2585 ntBASIC13.13□□□□□ -0.31
Pcdhga6Q91XY2 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhga6Q91XY2 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC13.13□□□□□ -0.31
Pcdhga6Q91XY2 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC13.13□□□□□ -0.31
Pcdhga6Q91XY2 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhga6Q91XY2 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhga6Q91XY2 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
Pcdhga6Q91XY2 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhga6Q91XY2 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhga6Q91XY2 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhga6Q91XY2 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhga6Q91XY2 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhga6Q91XY2 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhga6Q91XY2 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhga6Q91XY2 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhga6Q91XY2 Gm6198-201ENSMUST00000191337 2929 ntBASIC13.12□□□□□ -0.31
Pcdhga6Q91XY2 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhga6Q91XY2 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhga6Q91XY2 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC13.12□□□□□ -0.31
Pcdhga6Q91XY2 Gm12176-201ENSMUST00000121420 875 ntBASIC13.12□□□□□ -0.31
Pcdhga6Q91XY2 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhga6Q91XY2 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Pcdhga6Q91XY2 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC13.12□□□□□ -0.31
Pcdhga6Q91XY2 Gm37986-201ENSMUST00000193285 383 ntBASIC13.12□□□□□ -0.31
Pcdhga6Q91XY2 Gm37922-201ENSMUST00000195596 455 ntBASIC13.12□□□□□ -0.31
Pcdhga6Q91XY2 AC131690.1-201ENSMUST00000218406 374 ntBASIC13.12□□□□□ -0.31
Pcdhga6Q91XY2 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Pcdhga6Q91XY2 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Pcdhga6Q91XY2 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Pcdhga6Q91XY2 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Pcdhga6Q91XY2 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhga6Q91XY2 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhga6Q91XY2 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC13.12□□□□□ -0.31
Pcdhga6Q91XY2 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhga6Q91XY2 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC13.12□□□□□ -0.31
Pcdhga6Q91XY2 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhga6Q91XY2 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhga6Q91XY2 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhga6Q91XY2 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Pcdhga6Q91XY2 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhga6Q91XY2 Gm9333-201ENSMUST00000205452 1323 ntBASIC13.12□□□□□ -0.31
Pcdhga6Q91XY2 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhga6Q91XY2 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Pcdhga6Q91XY2 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhga6Q91XY2 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhga6Q91XY2 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhga6Q91XY2 Gm38346-201ENSMUST00000192379 2639 ntBASIC13.11□□□□□ -0.31
Pcdhga6Q91XY2 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhga6Q91XY2 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhga6Q91XY2 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhga6Q91XY2 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Pcdhga6Q91XY2 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Pcdhga6Q91XY2 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhga6Q91XY2 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhga6Q91XY2 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhga6Q91XY2 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Pcdhga6Q91XY2 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC13.11□□□□□ -0.31
Pcdhga6Q91XY2 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhga6Q91XY2 Gm2420-202ENSMUST00000202224 2249 ntBASIC13.11□□□□□ -0.31
Pcdhga6Q91XY2 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhga6Q91XY2 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhga6Q91XY2 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhga6Q91XY2 Gm15370-201ENSMUST00000117158 253 ntBASIC13.11□□□□□ -0.31
Pcdhga6Q91XY2 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC13.11□□□□□ -0.31
Pcdhga6Q91XY2 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC13.11□□□□□ -0.31
Pcdhga6Q91XY2 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC13.11□□□□□ -0.31
Pcdhga6Q91XY2 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC13.11□□□□□ -0.31
Pcdhga6Q91XY2 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC13.11□□□□□ -0.31
Pcdhga6Q91XY2 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC13.11□□□□□ -0.31
Pcdhga6Q91XY2 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhga6Q91XY2 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhga6Q91XY2 Gm6621-201ENSMUST00000193251 772 ntBASIC13.11□□□□□ -0.31
Pcdhga6Q91XY2 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhga6Q91XY2 Gm37497-201ENSMUST00000195830 798 ntBASIC13.11□□□□□ -0.31
Pcdhga6Q91XY2 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Pcdhga6Q91XY2 Tyms-ps-201ENSMUST00000219550 915 ntBASIC13.11□□□□□ -0.31
Pcdhga6Q91XY2 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC13.11□□□□□ -0.31
Pcdhga6Q91XY2 Gm8227-201ENSMUST00000223306 571 ntBASIC13.11□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms