Protein–RNA interactions for Protein: Q91VN6

Ddx41, Probable ATP-dependent RNA helicase DDX41, mousemouse

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx41Q91VN6 Gm10156-201ENSMUST00000122364 462 ntBASIC15.11■□□□□ 0.01
Ddx41Q91VN6 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC15.11■□□□□ 0.01
Ddx41Q91VN6 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ddx41Q91VN6 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC15.11■□□□□ 0.01
Ddx41Q91VN6 Gm9728-201ENSMUST00000200197 1055 ntBASIC15.11■□□□□ 0.01
Ddx41Q91VN6 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
Ddx41Q91VN6 AC155237.1-201ENSMUST00000226196 1279 ntBASIC15.11■□□□□ 0.01
Ddx41Q91VN6 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Ddx41Q91VN6 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ddx41Q91VN6 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ddx41Q91VN6 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC15.11■□□□□ 0.01
Ddx41Q91VN6 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ddx41Q91VN6 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ddx41Q91VN6 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ddx41Q91VN6 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Ddx41Q91VN6 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ddx41Q91VN6 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Ddx41Q91VN6 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ddx41Q91VN6 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Ddx41Q91VN6 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC15.1■□□□□ 0.01
Ddx41Q91VN6 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Ddx41Q91VN6 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ddx41Q91VN6 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Ddx41Q91VN6 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ddx41Q91VN6 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Ddx41Q91VN6 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ddx41Q91VN6 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ddx41Q91VN6 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ddx41Q91VN6 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ddx41Q91VN6 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Ddx41Q91VN6 Gm16177-201ENSMUST00000120728 718 ntBASIC15.1■□□□□ 0.01
Ddx41Q91VN6 Trav4d-2-201ENSMUST00000120914 335 ntBASIC15.1■□□□□ 0.01
Ddx41Q91VN6 Gm8062-201ENSMUST00000139696 444 ntBASIC15.1■□□□□ 0.01
Ddx41Q91VN6 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Ddx41Q91VN6 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Ddx41Q91VN6 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Ddx41Q91VN6 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC15.1■□□□□ 0.01
Ddx41Q91VN6 Gm40466-201ENSMUST00000212174 422 ntBASIC15.1■□□□□ 0.01
Ddx41Q91VN6 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ddx41Q91VN6 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ddx41Q91VN6 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ddx41Q91VN6 Rn7sk-201ENSMUST00000083103 331 ntBASIC15.1■□□□□ 0.01
Ddx41Q91VN6 Gm26315-201ENSMUST00000083890 321 ntBASIC15.1■□□□□ 0.01
Ddx41Q91VN6 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ddx41Q91VN6 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ddx41Q91VN6 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ddx41Q91VN6 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ddx41Q91VN6 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ddx41Q91VN6 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ddx41Q91VN6 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ddx41Q91VN6 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ddx41Q91VN6 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ddx41Q91VN6 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
Ddx41Q91VN6 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Ddx41Q91VN6 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Ddx41Q91VN6 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ddx41Q91VN6 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ddx41Q91VN6 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ddx41Q91VN6 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Ddx41Q91VN6 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ddx41Q91VN6 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ddx41Q91VN6 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ddx41Q91VN6 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC15.09■□□□□ 0.01
Ddx41Q91VN6 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ddx41Q91VN6 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ddx41Q91VN6 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC15.09■□□□□ 0.01
Ddx41Q91VN6 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Ddx41Q91VN6 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ddx41Q91VN6 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ddx41Q91VN6 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Ddx41Q91VN6 Gm8213-201ENSMUST00000118191 441 ntBASIC15.09■□□□□ 0.01
Ddx41Q91VN6 Gm12384-201ENSMUST00000119228 919 ntBASIC15.09■□□□□ 0.01
Ddx41Q91VN6 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC15.09■□□□□ 0.01
Ddx41Q91VN6 Gm43818-201ENSMUST00000200605 466 ntBASIC15.09■□□□□ 0.01
Ddx41Q91VN6 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ddx41Q91VN6 AC126253.1-201ENSMUST00000227974 824 ntBASIC15.09■□□□□ 0.01
Ddx41Q91VN6 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ddx41Q91VN6 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Ddx41Q91VN6 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Ddx41Q91VN6 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Ddx41Q91VN6 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Ddx41Q91VN6 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Ddx41Q91VN6 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
Ddx41Q91VN6 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC15.09■□□□□ 0.01
Ddx41Q91VN6 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ddx41Q91VN6 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ddx41Q91VN6 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ddx41Q91VN6 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ddx41Q91VN6 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ddx41Q91VN6 Gm9755-201ENSMUST00000032981 1356 ntBASIC15.09■□□□□ 0.01
Ddx41Q91VN6 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Ddx41Q91VN6 Gm7553-201ENSMUST00000185805 1426 ntBASIC15.09■□□□□ 0.01
Ddx41Q91VN6 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Ddx41Q91VN6 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0.01
Ddx41Q91VN6 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC15.08■□□□□ 0.01
Ddx41Q91VN6 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Ddx41Q91VN6 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Ddx41Q91VN6 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0.01
Ddx41Q91VN6 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Ddx41Q91VN6 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC15.08■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms