Protein–RNA interactions for Protein: Q8VC31

Ccdc9, Coiled-coil domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9Q8VC31 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Ccdc9Q8VC31 Gm35960-201ENSMUST00000202712 767 ntBASIC15.79■□□□□ 0.12
Ccdc9Q8VC31 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC15.79■□□□□ 0.12
Ccdc9Q8VC31 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC15.79■□□□□ 0.12
Ccdc9Q8VC31 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ccdc9Q8VC31 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ccdc9Q8VC31 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ccdc9Q8VC31 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ccdc9Q8VC31 Rnf165-202ENSMUST00000182024 4309 ntTSL 5 BASIC15.79■□□□□ 0.12
Ccdc9Q8VC31 P2rx7-203ENSMUST00000100737 4936 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ccdc9Q8VC31 Knop1-202ENSMUST00000063607 4884 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ccdc9Q8VC31 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ccdc9Q8VC31 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ccdc9Q8VC31 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ccdc9Q8VC31 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ccdc9Q8VC31 Gm20649-201ENSMUST00000160950 2740 ntTSL 2 BASIC15.79■□□□□ 0.12
Ccdc9Q8VC31 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC15.79■□□□□ 0.12
Ccdc9Q8VC31 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC15.79■□□□□ 0.12
Ccdc9Q8VC31 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ccdc9Q8VC31 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Ccdc9Q8VC31 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Ccdc9Q8VC31 Ehbp1-202ENSMUST00000109563 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ccdc9Q8VC31 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ccdc9Q8VC31 Vipas39-203ENSMUST00000179379 2418 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Ccdc9Q8VC31 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ccdc9Q8VC31 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ccdc9Q8VC31 Zmynd8-203ENSMUST00000099084 5232 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Ccdc9Q8VC31 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
Ccdc9Q8VC31 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Ccdc9Q8VC31 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ccdc9Q8VC31 Pnpla6-212ENSMUST00000208002 4444 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Ccdc9Q8VC31 AC119177.1-201ENSMUST00000227647 1332 ntBASIC15.78■□□□□ 0.12
Ccdc9Q8VC31 2810404F17Rik-201ENSMUST00000156615 1704 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Ccdc9Q8VC31 Pip5k1b-201ENSMUST00000025800 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ccdc9Q8VC31 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ccdc9Q8VC31 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC15.78■□□□□ 0.12
Ccdc9Q8VC31 Gm6944-201ENSMUST00000182449 1006 ntBASIC15.78■□□□□ 0.12
Ccdc9Q8VC31 Gm43935-201ENSMUST00000203569 1050 ntBASIC15.78■□□□□ 0.12
Ccdc9Q8VC31 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC15.78■□□□□ 0.12
Ccdc9Q8VC31 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Ccdc9Q8VC31 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ccdc9Q8VC31 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC15.78■□□□□ 0.12
Ccdc9Q8VC31 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ccdc9Q8VC31 Hcn1-201ENSMUST00000006991 14141 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ccdc9Q8VC31 Adgre5-203ENSMUST00000109802 2867 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Ccdc9Q8VC31 Abi1-203ENSMUST00000093171 2411 ntAPPRIS ALT1 TSL 5 BASIC15.78■□□□□ 0.12
Ccdc9Q8VC31 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ccdc9Q8VC31 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Ccdc9Q8VC31 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ccdc9Q8VC31 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC15.78■□□□□ 0.12
Ccdc9Q8VC31 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC15.78■□□□□ 0.12
Ccdc9Q8VC31 Celsr3-207ENSMUST00000213524 9930 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ccdc9Q8VC31 Tcf7l2-207ENSMUST00000111653 2629 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
Ccdc9Q8VC31 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Ccdc9Q8VC31 AC122811.1-201ENSMUST00000222257 2921 ntBASIC15.78■□□□□ 0.12
Ccdc9Q8VC31 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ccdc9Q8VC31 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Ccdc9Q8VC31 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Ccdc9Q8VC31 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Ccdc9Q8VC31 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Ccdc9Q8VC31 Usp22-201ENSMUST00000041683 4434 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Ccdc9Q8VC31 Anp32e-202ENSMUST00000165307 3274 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
Ccdc9Q8VC31 Per1-202ENSMUST00000101004 3507 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Ccdc9Q8VC31 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Ccdc9Q8VC31 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC15.77■□□□□ 0.12
Ccdc9Q8VC31 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC15.77■□□□□ 0.12
Ccdc9Q8VC31 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC15.77■□□□□ 0.12
Ccdc9Q8VC31 Gm18246-201ENSMUST00000221023 728 ntBASIC15.77■□□□□ 0.12
Ccdc9Q8VC31 Gm7461-201ENSMUST00000058918 827 ntBASIC15.77■□□□□ 0.12
Ccdc9Q8VC31 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
Ccdc9Q8VC31 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Ccdc9Q8VC31 Zkscan14-203ENSMUST00000198959 2243 ntBASIC15.77■□□□□ 0.12
Ccdc9Q8VC31 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Ccdc9Q8VC31 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Ccdc9Q8VC31 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC15.77■□□□□ 0.11
Ccdc9Q8VC31 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Ccdc9Q8VC31 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Ccdc9Q8VC31 Gm42863-201ENSMUST00000197875 2958 ntBASIC15.77■□□□□ 0.11
Ccdc9Q8VC31 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Ccdc9Q8VC31 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
Ccdc9Q8VC31 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Ccdc9Q8VC31 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC15.76■□□□□ 0.11
Ccdc9Q8VC31 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ccdc9Q8VC31 Cyp26b1-202ENSMUST00000168003 4170 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ccdc9Q8VC31 Cyp26b1-201ENSMUST00000077705 4157 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ccdc9Q8VC31 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ccdc9Q8VC31 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ccdc9Q8VC31 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ccdc9Q8VC31 Tunar-201ENSMUST00000180458 3282 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ccdc9Q8VC31 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Ccdc9Q8VC31 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ccdc9Q8VC31 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ccdc9Q8VC31 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Ccdc9Q8VC31 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Ccdc9Q8VC31 Gm15593-201ENSMUST00000122085 1008 ntBASIC15.76■□□□□ 0.11
Ccdc9Q8VC31 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Ccdc9Q8VC31 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC15.76■□□□□ 0.11
Ccdc9Q8VC31 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Ccdc9Q8VC31 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Ccdc9Q8VC31 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC15.76■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms