Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC10.73□□□□□ -0.69
Nup35Q8R4R6 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Nup35Q8R4R6 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Nup35Q8R4R6 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Nup35Q8R4R6 Adra1a-206ENSMUST00000225182 2337 ntBASIC10.73□□□□□ -0.69
Nup35Q8R4R6 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC10.73□□□□□ -0.69
Nup35Q8R4R6 Matn2-203ENSMUST00000226766 3252 ntBASIC10.73□□□□□ -0.69
Nup35Q8R4R6 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Nup35Q8R4R6 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC10.72□□□□□ -0.69
Nup35Q8R4R6 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Nup35Q8R4R6 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Nup35Q8R4R6 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Nup35Q8R4R6 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Nup35Q8R4R6 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC10.72□□□□□ -0.69
Nup35Q8R4R6 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Nup35Q8R4R6 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Nup35Q8R4R6 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC10.72□□□□□ -0.69
Nup35Q8R4R6 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Nup35Q8R4R6 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Nup35Q8R4R6 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC10.72□□□□□ -0.69
Nup35Q8R4R6 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Nup35Q8R4R6 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Nup35Q8R4R6 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Nup35Q8R4R6 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Nup35Q8R4R6 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Nup35Q8R4R6 Gm8410-201ENSMUST00000117225 605 ntBASIC10.72□□□□□ -0.69
Nup35Q8R4R6 Gm6415-201ENSMUST00000118488 348 ntBASIC10.72□□□□□ -0.69
Nup35Q8R4R6 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Nup35Q8R4R6 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Nup35Q8R4R6 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Nup35Q8R4R6 Gm27622-201ENSMUST00000183779 60 ntBASIC10.72□□□□□ -0.69
Nup35Q8R4R6 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC10.72□□□□□ -0.69
Nup35Q8R4R6 Gm10253-201ENSMUST00000194270 940 ntBASIC10.72□□□□□ -0.69
Nup35Q8R4R6 Gm5779-201ENSMUST00000218467 910 ntBASIC10.72□□□□□ -0.69
Nup35Q8R4R6 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC10.72□□□□□ -0.69
Nup35Q8R4R6 Ndufaf2-202ENSMUST00000223734 556 ntBASIC10.72□□□□□ -0.69
Nup35Q8R4R6 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Nup35Q8R4R6 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Nup35Q8R4R6 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Nup35Q8R4R6 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
Nup35Q8R4R6 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC10.72□□□□□ -0.69
Nup35Q8R4R6 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC10.72□□□□□ -0.69
Nup35Q8R4R6 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Nup35Q8R4R6 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Nup35Q8R4R6 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Nup35Q8R4R6 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Nup35Q8R4R6 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Nup35Q8R4R6 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Nup35Q8R4R6 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Nup35Q8R4R6 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Nup35Q8R4R6 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC10.72□□□□□ -0.69
Nup35Q8R4R6 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
Nup35Q8R4R6 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Nup35Q8R4R6 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Nup35Q8R4R6 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Nup35Q8R4R6 Gm37472-201ENSMUST00000192342 4052 ntBASIC10.72□□□□□ -0.69
Nup35Q8R4R6 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Nup35Q8R4R6 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Nup35Q8R4R6 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Nup35Q8R4R6 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Nup35Q8R4R6 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Nup35Q8R4R6 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC10.72□□□□□ -0.69
Nup35Q8R4R6 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Nup35Q8R4R6 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Nup35Q8R4R6 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Nup35Q8R4R6 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Nup35Q8R4R6 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC10.71□□□□□ -0.69
Nup35Q8R4R6 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Nup35Q8R4R6 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Nup35Q8R4R6 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Nup35Q8R4R6 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Nup35Q8R4R6 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Nup35Q8R4R6 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Nup35Q8R4R6 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC10.71□□□□□ -0.69
Nup35Q8R4R6 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
Nup35Q8R4R6 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Nup35Q8R4R6 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Nup35Q8R4R6 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Nup35Q8R4R6 Gm15693-201ENSMUST00000120470 637 ntBASIC10.71□□□□□ -0.69
Nup35Q8R4R6 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Nup35Q8R4R6 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Nup35Q8R4R6 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC10.71□□□□□ -0.69
Nup35Q8R4R6 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC10.71□□□□□ -0.69
Nup35Q8R4R6 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
Nup35Q8R4R6 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Nup35Q8R4R6 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Nup35Q8R4R6 CT009757.3-201ENSMUST00000223367 2320 ntBASIC10.71□□□□□ -0.69
Nup35Q8R4R6 AC159195.1-201ENSMUST00000225867 2086 ntBASIC10.71□□□□□ -0.69
Nup35Q8R4R6 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Nup35Q8R4R6 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Nup35Q8R4R6 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Nup35Q8R4R6 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Nup35Q8R4R6 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Nup35Q8R4R6 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Nup35Q8R4R6 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Nup35Q8R4R6 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Nup35Q8R4R6 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Nup35Q8R4R6 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC10.71□□□□□ -0.69
Nup35Q8R4R6 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Nup35Q8R4R6 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC10.71□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 50.2 ms