Protein–RNA interactions for Protein: Q8R2Q0

Trim29, Tripartite motif-containing protein 29, mousemouse

Predictions only

Length 587 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim29Q8R2Q0 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC15.03■□□□□ -0
Trim29Q8R2Q0 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trim29Q8R2Q0 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trim29Q8R2Q0 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trim29Q8R2Q0 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC15.03■□□□□ -0
Trim29Q8R2Q0 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC15.03■□□□□ -0
Trim29Q8R2Q0 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trim29Q8R2Q0 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC15.03■□□□□ -0
Trim29Q8R2Q0 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Trim29Q8R2Q0 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trim29Q8R2Q0 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC15.03■□□□□ -0
Trim29Q8R2Q0 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC15.03■□□□□ -0
Trim29Q8R2Q0 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trim29Q8R2Q0 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC15.02■□□□□ -0
Trim29Q8R2Q0 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trim29Q8R2Q0 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trim29Q8R2Q0 AC137842.1-201ENSMUST00000227896 2064 ntBASIC15.02■□□□□ -0
Trim29Q8R2Q0 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trim29Q8R2Q0 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trim29Q8R2Q0 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trim29Q8R2Q0 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC15.02■□□□□ -0
Trim29Q8R2Q0 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trim29Q8R2Q0 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Trim29Q8R2Q0 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trim29Q8R2Q0 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
Trim29Q8R2Q0 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trim29Q8R2Q0 Gm5939-201ENSMUST00000119613 2874 ntBASIC15.02■□□□□ -0
Trim29Q8R2Q0 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Trim29Q8R2Q0 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC15.02■□□□□ -0
Trim29Q8R2Q0 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC15.02■□□□□ -0
Trim29Q8R2Q0 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
Trim29Q8R2Q0 Gm12091-201ENSMUST00000146791 830 ntBASIC15.02■□□□□ -0
Trim29Q8R2Q0 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trim29Q8R2Q0 Gm5745-201ENSMUST00000183748 313 ntBASIC15.02■□□□□ -0
Trim29Q8R2Q0 Gtpbp10-211ENSMUST00000198799 648 ntBASIC15.02■□□□□ -0
Trim29Q8R2Q0 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC15.02■□□□□ -0
Trim29Q8R2Q0 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Trim29Q8R2Q0 AC140375.2-201ENSMUST00000225283 584 ntBASIC15.02■□□□□ -0
Trim29Q8R2Q0 AC155252.1-201ENSMUST00000226462 1208 ntBASIC15.02■□□□□ -0
Trim29Q8R2Q0 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trim29Q8R2Q0 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trim29Q8R2Q0 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC15.02■□□□□ -0
Trim29Q8R2Q0 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trim29Q8R2Q0 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
Trim29Q8R2Q0 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trim29Q8R2Q0 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Trim29Q8R2Q0 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trim29Q8R2Q0 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trim29Q8R2Q0 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC15.02□□□□□ -0.01
Trim29Q8R2Q0 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trim29Q8R2Q0 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trim29Q8R2Q0 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trim29Q8R2Q0 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC15.02□□□□□ -0.01
Trim29Q8R2Q0 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
Trim29Q8R2Q0 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC15.02□□□□□ -0.01
Trim29Q8R2Q0 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Trim29Q8R2Q0 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Trim29Q8R2Q0 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Trim29Q8R2Q0 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trim29Q8R2Q0 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC15.01□□□□□ -0.01
Trim29Q8R2Q0 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trim29Q8R2Q0 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trim29Q8R2Q0 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trim29Q8R2Q0 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trim29Q8R2Q0 Gm43364-201ENSMUST00000196046 3274 ntBASIC15.01□□□□□ -0.01
Trim29Q8R2Q0 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trim29Q8R2Q0 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trim29Q8R2Q0 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Trim29Q8R2Q0 Gm43423-201ENSMUST00000198390 2094 ntBASIC15.01□□□□□ -0.01
Trim29Q8R2Q0 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC15.01□□□□□ -0.01
Trim29Q8R2Q0 Gm27701-201ENSMUST00000184498 110 ntBASIC15.01□□□□□ -0.01
Trim29Q8R2Q0 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC15.01□□□□□ -0.01
Trim29Q8R2Q0 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trim29Q8R2Q0 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trim29Q8R2Q0 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC15.01□□□□□ -0.01
Trim29Q8R2Q0 AC154276.1-201ENSMUST00000228874 1299 ntBASIC15.01□□□□□ -0.01
Trim29Q8R2Q0 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Trim29Q8R2Q0 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Trim29Q8R2Q0 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trim29Q8R2Q0 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Trim29Q8R2Q0 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trim29Q8R2Q0 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Trim29Q8R2Q0 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trim29Q8R2Q0 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Trim29Q8R2Q0 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trim29Q8R2Q0 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trim29Q8R2Q0 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Trim29Q8R2Q0 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trim29Q8R2Q0 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC15.01□□□□□ -0.01
Trim29Q8R2Q0 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trim29Q8R2Q0 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Trim29Q8R2Q0 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
Trim29Q8R2Q0 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Trim29Q8R2Q0 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Trim29Q8R2Q0 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trim29Q8R2Q0 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Trim29Q8R2Q0 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Trim29Q8R2Q0 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trim29Q8R2Q0 Abhd6-203ENSMUST00000225234 1958 ntBASIC15□□□□□ -0.01
Trim29Q8R2Q0 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 60.5 ms