Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ddx54Q8K4L0 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ddx54Q8K4L0 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ddx54Q8K4L0 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ddx54Q8K4L0 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ddx54Q8K4L0 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC17.08■□□□□ 0.33
Ddx54Q8K4L0 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC17.08■□□□□ 0.33
Ddx54Q8K4L0 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ddx54Q8K4L0 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC17.08■□□□□ 0.33
Ddx54Q8K4L0 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ddx54Q8K4L0 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ddx54Q8K4L0 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Ddx54Q8K4L0 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ddx54Q8K4L0 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC17.08■□□□□ 0.32
Ddx54Q8K4L0 Cd79b-201ENSMUST00000044228 1431 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ddx54Q8K4L0 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ddx54Q8K4L0 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Ddx54Q8K4L0 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC17.08■□□□□ 0.32
Ddx54Q8K4L0 Gm13736-201ENSMUST00000119272 253 ntBASIC17.08■□□□□ 0.32
Ddx54Q8K4L0 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Ddx54Q8K4L0 Tmem190-201ENSMUST00000013235 589 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ddx54Q8K4L0 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC17.08■□□□□ 0.32
Ddx54Q8K4L0 Gm29155-201ENSMUST00000185910 269 ntBASIC17.08■□□□□ 0.32
Ddx54Q8K4L0 3110080O07Rik-201ENSMUST00000193469 1021 ntBASIC17.08■□□□□ 0.32
Ddx54Q8K4L0 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ddx54Q8K4L0 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Ddx54Q8K4L0 Olfr707-202ENSMUST00000208759 1242 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.32
Ddx54Q8K4L0 AC099645.1-201ENSMUST00000226476 1105 ntBASIC17.08■□□□□ 0.32
Ddx54Q8K4L0 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Ddx54Q8K4L0 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC17.08■□□□□ 0.32
Ddx54Q8K4L0 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ddx54Q8K4L0 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ddx54Q8K4L0 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC17.08■□□□□ 0.32
Ddx54Q8K4L0 Gm10584-201ENSMUST00000207036 2628 ntBASIC17.08■□□□□ 0.32
Ddx54Q8K4L0 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ddx54Q8K4L0 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ddx54Q8K4L0 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Ddx54Q8K4L0 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ddx54Q8K4L0 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC17.08■□□□□ 0.32
Ddx54Q8K4L0 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ddx54Q8K4L0 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Ddx54Q8K4L0 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ddx54Q8K4L0 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC17.07■□□□□ 0.32
Ddx54Q8K4L0 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ddx54Q8K4L0 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ddx54Q8K4L0 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ddx54Q8K4L0 Ttc4-202ENSMUST00000106772 935 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Ddx54Q8K4L0 Gm12380-201ENSMUST00000119012 544 ntBASIC17.07■□□□□ 0.32
Ddx54Q8K4L0 Rpsa-ps4-201ENSMUST00000121691 888 ntBASIC17.07■□□□□ 0.32
Ddx54Q8K4L0 Rps2-ps4-201ENSMUST00000121977 633 ntBASIC17.07■□□□□ 0.32
Ddx54Q8K4L0 Gm6254-201ENSMUST00000168178 1072 ntBASIC17.07■□□□□ 0.32
Ddx54Q8K4L0 Gm25951-201ENSMUST00000175330 64 ntBASIC17.07■□□□□ 0.32
Ddx54Q8K4L0 Gm43416-201ENSMUST00000201916 1015 ntBASIC17.07■□□□□ 0.32
Ddx54Q8K4L0 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC17.07■□□□□ 0.32
Ddx54Q8K4L0 Cct2-206ENSMUST00000219573 637 ntTSL 3 BASIC17.07■□□□□ 0.32
Ddx54Q8K4L0 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ddx54Q8K4L0 Olfr1250-201ENSMUST00000099768 1139 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Ddx54Q8K4L0 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ddx54Q8K4L0 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Ddx54Q8K4L0 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ddx54Q8K4L0 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ddx54Q8K4L0 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ddx54Q8K4L0 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC17.07■□□□□ 0.32
Ddx54Q8K4L0 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ddx54Q8K4L0 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ddx54Q8K4L0 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC17.06■□□□□ 0.32
Ddx54Q8K4L0 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ddx54Q8K4L0 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ddx54Q8K4L0 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Ddx54Q8K4L0 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Ddx54Q8K4L0 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC17.06■□□□□ 0.32
Ddx54Q8K4L0 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Ddx54Q8K4L0 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ddx54Q8K4L0 Gm6580-201ENSMUST00000117504 1357 ntBASIC17.06■□□□□ 0.32
Ddx54Q8K4L0 Etv1-211ENSMUST00000162563 1865 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Ddx54Q8K4L0 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ddx54Q8K4L0 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Ddx54Q8K4L0 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ddx54Q8K4L0 Gm13047-201ENSMUST00000117116 815 ntBASIC17.06■□□□□ 0.32
Ddx54Q8K4L0 Gm15711-201ENSMUST00000118889 535 ntBASIC17.06■□□□□ 0.32
Ddx54Q8K4L0 Gm6039-201ENSMUST00000121667 1250 ntBASIC17.06■□□□□ 0.32
Ddx54Q8K4L0 9430091E24Rik-201ENSMUST00000127301 1067 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Ddx54Q8K4L0 H1foo-203ENSMUST00000161969 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ddx54Q8K4L0 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC17.06■□□□□ 0.32
Ddx54Q8K4L0 1700039I01Rik-201ENSMUST00000194370 479 ntBASIC17.06■□□□□ 0.32
Ddx54Q8K4L0 Gm5369-201ENSMUST00000217499 588 ntBASIC17.06■□□□□ 0.32
Ddx54Q8K4L0 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Ddx54Q8K4L0 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ddx54Q8K4L0 Tepp-201ENSMUST00000098480 660 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ddx54Q8K4L0 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ddx54Q8K4L0 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ddx54Q8K4L0 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ddx54Q8K4L0 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ddx54Q8K4L0 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC17.06■□□□□ 0.32
Ddx54Q8K4L0 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Ddx54Q8K4L0 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Ddx54Q8K4L0 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Ddx54Q8K4L0 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ddx54Q8K4L0 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ddx54Q8K4L0 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC17.05■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 94.1 ms