Protein–RNA interactions for Protein: Q8CII8

Syne4, Nesprin-4, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne4Q8CII8 Ighv8-10-201ENSMUST00000199579 358 ntBASIC14.8□□□□□ -0.04
Syne4Q8CII8 Net1-206ENSMUST00000222504 447 ntTSL 3 BASIC14.8□□□□□ -0.04
Syne4Q8CII8 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Syne4Q8CII8 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Syne4Q8CII8 Gm3287-205ENSMUST00000228893 1332 ntBASIC14.8□□□□□ -0.04
Syne4Q8CII8 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Syne4Q8CII8 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Syne4Q8CII8 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Syne4Q8CII8 Gm37827-201ENSMUST00000194486 1542 ntBASIC14.8□□□□□ -0.04
Syne4Q8CII8 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Syne4Q8CII8 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Syne4Q8CII8 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Syne4Q8CII8 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Syne4Q8CII8 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Syne4Q8CII8 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC14.8□□□□□ -0.04
Syne4Q8CII8 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Syne4Q8CII8 Gm28182-201ENSMUST00000188354 2477 ntBASIC14.8□□□□□ -0.04
Syne4Q8CII8 Gm43697-201ENSMUST00000199637 2581 ntBASIC14.8□□□□□ -0.04
Syne4Q8CII8 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Syne4Q8CII8 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Syne4Q8CII8 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Syne4Q8CII8 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Syne4Q8CII8 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC14.79□□□□□ -0.04
Syne4Q8CII8 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Syne4Q8CII8 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Syne4Q8CII8 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Syne4Q8CII8 Bnip3l-ps-201ENSMUST00000101577 657 ntBASIC14.79□□□□□ -0.04
Syne4Q8CII8 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Syne4Q8CII8 Gm23200-201ENSMUST00000104379 132 ntBASIC14.79□□□□□ -0.04
Syne4Q8CII8 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC14.79□□□□□ -0.04
Syne4Q8CII8 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Syne4Q8CII8 Gm20426-201ENSMUST00000173657 440 ntBASIC14.79□□□□□ -0.04
Syne4Q8CII8 Gm9061-201ENSMUST00000182707 1006 ntBASIC14.79□□□□□ -0.04
Syne4Q8CII8 Gm43908-201ENSMUST00000205074 1472 ntBASIC14.79□□□□□ -0.04
Syne4Q8CII8 Gm44651-201ENSMUST00000207343 372 ntBASIC14.79□□□□□ -0.04
Syne4Q8CII8 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Syne4Q8CII8 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC14.79□□□□□ -0.04
Syne4Q8CII8 Bnip3l-ps-202ENSMUST00000220709 1132 ntBASIC14.79□□□□□ -0.04
Syne4Q8CII8 AC126444.1-201ENSMUST00000225938 1768 ntBASIC14.79□□□□□ -0.04
Syne4Q8CII8 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Syne4Q8CII8 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Syne4Q8CII8 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Syne4Q8CII8 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Syne4Q8CII8 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Syne4Q8CII8 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Syne4Q8CII8 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Syne4Q8CII8 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Syne4Q8CII8 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Syne4Q8CII8 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Syne4Q8CII8 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Syne4Q8CII8 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC14.78□□□□□ -0.04
Syne4Q8CII8 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Syne4Q8CII8 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC14.78□□□□□ -0.04
Syne4Q8CII8 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC14.78□□□□□ -0.04
Syne4Q8CII8 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Syne4Q8CII8 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Syne4Q8CII8 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Syne4Q8CII8 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Syne4Q8CII8 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Syne4Q8CII8 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Syne4Q8CII8 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Syne4Q8CII8 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Syne4Q8CII8 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Syne4Q8CII8 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Syne4Q8CII8 Gm8908-201ENSMUST00000121633 1024 ntBASIC14.78□□□□□ -0.04
Syne4Q8CII8 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC14.78□□□□□ -0.04
Syne4Q8CII8 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC14.78□□□□□ -0.04
Syne4Q8CII8 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC14.78□□□□□ -0.04
Syne4Q8CII8 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Syne4Q8CII8 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Syne4Q8CII8 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Syne4Q8CII8 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Syne4Q8CII8 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Syne4Q8CII8 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Syne4Q8CII8 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Syne4Q8CII8 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Syne4Q8CII8 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC14.77□□□□□ -0.04
Syne4Q8CII8 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Syne4Q8CII8 Tmed9-203ENSMUST00000224741 1450 ntBASIC14.77□□□□□ -0.04
Syne4Q8CII8 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Syne4Q8CII8 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Syne4Q8CII8 Batf2-201ENSMUST00000045042 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Syne4Q8CII8 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Syne4Q8CII8 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Syne4Q8CII8 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Syne4Q8CII8 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Syne4Q8CII8 Gm13996-201ENSMUST00000118456 430 ntBASIC14.77□□□□□ -0.05
Syne4Q8CII8 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC14.77□□□□□ -0.05
Syne4Q8CII8 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC14.77□□□□□ -0.05
Syne4Q8CII8 Gm23363-201ENSMUST00000175024 79 ntBASIC14.77□□□□□ -0.05
Syne4Q8CII8 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC14.77□□□□□ -0.05
Syne4Q8CII8 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC14.77□□□□□ -0.05
Syne4Q8CII8 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Syne4Q8CII8 AC153974.2-201ENSMUST00000218577 1025 ntBASIC14.77□□□□□ -0.05
Syne4Q8CII8 Gm45925-201ENSMUST00000218882 744 ntBASIC14.77□□□□□ -0.05
Syne4Q8CII8 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Syne4Q8CII8 CT009718.3-201ENSMUST00000221116 367 ntBASIC14.77□□□□□ -0.05
Syne4Q8CII8 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC14.77□□□□□ -0.05
Syne4Q8CII8 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
Syne4Q8CII8 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 46.5 ms