Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Vps53Q8CCB4 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Vps53Q8CCB4 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Vps53Q8CCB4 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Vps53Q8CCB4 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Vps53Q8CCB4 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Vps53Q8CCB4 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Vps53Q8CCB4 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Vps53Q8CCB4 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Vps53Q8CCB4 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Vps53Q8CCB4 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Vps53Q8CCB4 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Vps53Q8CCB4 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Vps53Q8CCB4 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Vps53Q8CCB4 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Vps53Q8CCB4 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Vps53Q8CCB4 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Vps53Q8CCB4 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Vps53Q8CCB4 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Vps53Q8CCB4 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Vps53Q8CCB4 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Vps53Q8CCB4 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Vps53Q8CCB4 Gm15371-201ENSMUST00000117057 784 ntBASIC15.31■□□□□ 0.04
Vps53Q8CCB4 Gm15770-201ENSMUST00000117498 584 ntBASIC15.31■□□□□ 0.04
Vps53Q8CCB4 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC15.31■□□□□ 0.04
Vps53Q8CCB4 Gm26464-201ENSMUST00000157094 305 ntBASIC15.31■□□□□ 0.04
Vps53Q8CCB4 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC15.31■□□□□ 0.04
Vps53Q8CCB4 Gm27772-201ENSMUST00000184900 187 ntBASIC15.31■□□□□ 0.04
Vps53Q8CCB4 Gm29127-201ENSMUST00000188304 517 ntBASIC15.31■□□□□ 0.04
Vps53Q8CCB4 Gm5276-201ENSMUST00000196683 1047 ntBASIC15.31■□□□□ 0.04
Vps53Q8CCB4 Gm44974-201ENSMUST00000206387 1279 ntBASIC15.31■□□□□ 0.04
Vps53Q8CCB4 AC154171.1-201ENSMUST00000224610 643 ntBASIC15.31■□□□□ 0.04
Vps53Q8CCB4 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Vps53Q8CCB4 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Vps53Q8CCB4 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Vps53Q8CCB4 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Vps53Q8CCB4 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC15.31■□□□□ 0.04
Vps53Q8CCB4 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Vps53Q8CCB4 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Vps53Q8CCB4 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Vps53Q8CCB4 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Vps53Q8CCB4 Mbnl2-204ENSMUST00000227012 2390 ntBASIC15.31■□□□□ 0.04
Vps53Q8CCB4 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Vps53Q8CCB4 Gm37795-201ENSMUST00000194216 2459 ntBASIC15.31■□□□□ 0.04
Vps53Q8CCB4 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Vps53Q8CCB4 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vps53Q8CCB4 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vps53Q8CCB4 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vps53Q8CCB4 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Vps53Q8CCB4 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vps53Q8CCB4 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Vps53Q8CCB4 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC15.3■□□□□ 0.04
Vps53Q8CCB4 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vps53Q8CCB4 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Vps53Q8CCB4 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Vps53Q8CCB4 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vps53Q8CCB4 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC15.3■□□□□ 0.04
Vps53Q8CCB4 Gm15376-201ENSMUST00000122258 783 ntBASIC15.3■□□□□ 0.04
Vps53Q8CCB4 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC15.3■□□□□ 0.04
Vps53Q8CCB4 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Vps53Q8CCB4 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Vps53Q8CCB4 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
Vps53Q8CCB4 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Vps53Q8CCB4 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC15.3■□□□□ 0.04
Vps53Q8CCB4 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vps53Q8CCB4 Gm37015-201ENSMUST00000192763 1521 ntBASIC15.3■□□□□ 0.04
Vps53Q8CCB4 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Vps53Q8CCB4 Gm6983-201ENSMUST00000214912 628 ntBASIC15.3■□□□□ 0.04
Vps53Q8CCB4 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vps53Q8CCB4 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vps53Q8CCB4 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vps53Q8CCB4 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vps53Q8CCB4 Gm5422-201ENSMUST00000050717 2721 ntBASIC15.3■□□□□ 0.04
Vps53Q8CCB4 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vps53Q8CCB4 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vps53Q8CCB4 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Vps53Q8CCB4 Gm3695-201ENSMUST00000087222 1009 ntBASIC15.3■□□□□ 0.04
Vps53Q8CCB4 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vps53Q8CCB4 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vps53Q8CCB4 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vps53Q8CCB4 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Vps53Q8CCB4 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Vps53Q8CCB4 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Vps53Q8CCB4 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vps53Q8CCB4 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vps53Q8CCB4 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vps53Q8CCB4 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC15.29■□□□□ 0.04
Vps53Q8CCB4 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vps53Q8CCB4 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Vps53Q8CCB4 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vps53Q8CCB4 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vps53Q8CCB4 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vps53Q8CCB4 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vps53Q8CCB4 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Vps53Q8CCB4 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vps53Q8CCB4 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC15.29■□□□□ 0.04
Vps53Q8CCB4 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vps53Q8CCB4 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vps53Q8CCB4 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Vps53Q8CCB4 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms