Protein–RNA interactions for Protein: Q8CC84

Lysmd4, LysM and putative peptidoglycan-binding domain-containing protein 4, mousemouse

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd4Q8CC84 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Lysmd4Q8CC84 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Lysmd4Q8CC84 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Lysmd4Q8CC84 Gm3436-201ENSMUST00000179930 840 ntBASIC11.8□□□□□ -0.52
Lysmd4Q8CC84 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Lysmd4Q8CC84 Gm27430-201ENSMUST00000184585 107 ntBASIC11.8□□□□□ -0.52
Lysmd4Q8CC84 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC11.8□□□□□ -0.52
Lysmd4Q8CC84 Gm44333-201ENSMUST00000197168 107 ntBASIC11.8□□□□□ -0.52
Lysmd4Q8CC84 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Lysmd4Q8CC84 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Lysmd4Q8CC84 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Lysmd4Q8CC84 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Lysmd4Q8CC84 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Lysmd4Q8CC84 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Lysmd4Q8CC84 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC11.8□□□□□ -0.52
Lysmd4Q8CC84 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Lysmd4Q8CC84 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Lysmd4Q8CC84 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Lysmd4Q8CC84 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Lysmd4Q8CC84 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Lysmd4Q8CC84 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Lysmd4Q8CC84 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Lysmd4Q8CC84 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Lysmd4Q8CC84 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Lysmd4Q8CC84 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC11.8□□□□□ -0.52
Lysmd4Q8CC84 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Lysmd4Q8CC84 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Lysmd4Q8CC84 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Lysmd4Q8CC84 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Lysmd4Q8CC84 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Lysmd4Q8CC84 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Lysmd4Q8CC84 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Lysmd4Q8CC84 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Lysmd4Q8CC84 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Lysmd4Q8CC84 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Lysmd4Q8CC84 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Lysmd4Q8CC84 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC11.79□□□□□ -0.52
Lysmd4Q8CC84 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC11.79□□□□□ -0.52
Lysmd4Q8CC84 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Lysmd4Q8CC84 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Lysmd4Q8CC84 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC11.79□□□□□ -0.52
Lysmd4Q8CC84 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC11.79□□□□□ -0.52
Lysmd4Q8CC84 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC11.79□□□□□ -0.52
Lysmd4Q8CC84 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC11.79□□□□□ -0.52
Lysmd4Q8CC84 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Lysmd4Q8CC84 Gm45484-201ENSMUST00000210310 1141 ntBASIC11.79□□□□□ -0.52
Lysmd4Q8CC84 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Lysmd4Q8CC84 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
Lysmd4Q8CC84 Gm44292-201ENSMUST00000205194 2364 ntBASIC11.79□□□□□ -0.52
Lysmd4Q8CC84 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Lysmd4Q8CC84 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Lysmd4Q8CC84 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Lysmd4Q8CC84 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Lysmd4Q8CC84 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Lysmd4Q8CC84 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Lysmd4Q8CC84 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Lysmd4Q8CC84 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Lysmd4Q8CC84 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Lysmd4Q8CC84 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Lysmd4Q8CC84 Nupl1-206ENSMUST00000225111 2936 ntBASIC11.78□□□□□ -0.52
Lysmd4Q8CC84 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC11.78□□□□□ -0.52
Lysmd4Q8CC84 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Lysmd4Q8CC84 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Lysmd4Q8CC84 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Lysmd4Q8CC84 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Lysmd4Q8CC84 Gm42840-201ENSMUST00000200303 2251 ntBASIC11.78□□□□□ -0.52
Lysmd4Q8CC84 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Lysmd4Q8CC84 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Lysmd4Q8CC84 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Lysmd4Q8CC84 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Lysmd4Q8CC84 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Lysmd4Q8CC84 Gm7336-201ENSMUST00000107041 1232 ntBASIC11.78□□□□□ -0.52
Lysmd4Q8CC84 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Lysmd4Q8CC84 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC11.78□□□□□ -0.52
Lysmd4Q8CC84 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC11.78□□□□□ -0.52
Lysmd4Q8CC84 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC11.78□□□□□ -0.52
Lysmd4Q8CC84 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Lysmd4Q8CC84 Gm27702-201ENSMUST00000184512 56 ntBASIC11.78□□□□□ -0.52
Lysmd4Q8CC84 Gm27321-201ENSMUST00000185021 205 ntBASIC11.78□□□□□ -0.52
Lysmd4Q8CC84 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Lysmd4Q8CC84 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC11.78□□□□□ -0.52
Lysmd4Q8CC84 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Lysmd4Q8CC84 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Lysmd4Q8CC84 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Lysmd4Q8CC84 Gm8396-201ENSMUST00000057361 823 ntBASIC11.78□□□□□ -0.52
Lysmd4Q8CC84 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Lysmd4Q8CC84 Gm5161-201ENSMUST00000075243 853 ntBASIC11.78□□□□□ -0.52
Lysmd4Q8CC84 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Lysmd4Q8CC84 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC11.78□□□□□ -0.52
Lysmd4Q8CC84 Gm44758-201ENSMUST00000206096 2068 ntBASIC11.78□□□□□ -0.52
Lysmd4Q8CC84 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC11.78□□□□□ -0.52
Lysmd4Q8CC84 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC11.78□□□□□ -0.52
Lysmd4Q8CC84 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Lysmd4Q8CC84 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC11.78□□□□□ -0.52
Lysmd4Q8CC84 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Lysmd4Q8CC84 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Lysmd4Q8CC84 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Lysmd4Q8CC84 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Lysmd4Q8CC84 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Lysmd4Q8CC84 Gm6210-201ENSMUST00000204734 1942 ntBASIC11.78□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 96.5 ms