Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 AC123665.1-201ENSMUST00000228204 438 ntBASIC11.85□□□□□ -0.51
Col6a6Q8C6K9 Gm9826-201ENSMUST00000029124 1299 ntBASIC11.85□□□□□ -0.51
Col6a6Q8C6K9 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Col6a6Q8C6K9 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Col6a6Q8C6K9 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Col6a6Q8C6K9 Gm19221-201ENSMUST00000221827 1477 ntBASIC11.84□□□□□ -0.51
Col6a6Q8C6K9 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Col6a6Q8C6K9 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Col6a6Q8C6K9 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Col6a6Q8C6K9 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Col6a6Q8C6K9 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Col6a6Q8C6K9 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Col6a6Q8C6K9 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Col6a6Q8C6K9 Odf4-202ENSMUST00000125134 646 ntTSL 3 BASIC11.84□□□□□ -0.51
Col6a6Q8C6K9 Gm9550-201ENSMUST00000161130 862 ntBASIC11.84□□□□□ -0.51
Col6a6Q8C6K9 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC11.84□□□□□ -0.51
Col6a6Q8C6K9 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC11.84□□□□□ -0.51
Col6a6Q8C6K9 Gm8385-201ENSMUST00000058999 643 ntBASIC11.84□□□□□ -0.51
Col6a6Q8C6K9 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Col6a6Q8C6K9 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC11.84□□□□□ -0.51
Col6a6Q8C6K9 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Col6a6Q8C6K9 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Col6a6Q8C6K9 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Col6a6Q8C6K9 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC11.84□□□□□ -0.51
Col6a6Q8C6K9 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Col6a6Q8C6K9 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Col6a6Q8C6K9 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Col6a6Q8C6K9 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC11.84□□□□□ -0.51
Col6a6Q8C6K9 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Col6a6Q8C6K9 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Col6a6Q8C6K9 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Col6a6Q8C6K9 Gm43056-201ENSMUST00000197865 2791 ntBASIC11.84□□□□□ -0.51
Col6a6Q8C6K9 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Col6a6Q8C6K9 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Col6a6Q8C6K9 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC11.84□□□□□ -0.51
Col6a6Q8C6K9 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Col6a6Q8C6K9 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Col6a6Q8C6K9 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Col6a6Q8C6K9 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Col6a6Q8C6K9 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Col6a6Q8C6K9 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC11.84□□□□□ -0.51
Col6a6Q8C6K9 Gm14109-201ENSMUST00000118814 309 ntBASIC11.84□□□□□ -0.51
Col6a6Q8C6K9 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Col6a6Q8C6K9 Gm25043-201ENSMUST00000158604 212 ntBASIC11.84□□□□□ -0.51
Col6a6Q8C6K9 Gm5523-201ENSMUST00000180415 997 ntBASIC11.84□□□□□ -0.51
Col6a6Q8C6K9 Gm18916-201ENSMUST00000198264 1246 ntBASIC11.84□□□□□ -0.51
Col6a6Q8C6K9 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Col6a6Q8C6K9 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC11.84□□□□□ -0.51
Col6a6Q8C6K9 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC11.84□□□□□ -0.51
Col6a6Q8C6K9 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC11.84□□□□□ -0.51
Col6a6Q8C6K9 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Col6a6Q8C6K9 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Col6a6Q8C6K9 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC11.84□□□□□ -0.51
Col6a6Q8C6K9 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC11.83□□□□□ -0.51
Col6a6Q8C6K9 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC11.83□□□□□ -0.52
Col6a6Q8C6K9 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Col6a6Q8C6K9 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Col6a6Q8C6K9 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Col6a6Q8C6K9 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Col6a6Q8C6K9 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Col6a6Q8C6K9 Zfp157-203ENSMUST00000110912 886 ntTSL 3 BASIC11.83□□□□□ -0.52
Col6a6Q8C6K9 Olfr647-ps1-201ENSMUST00000121599 960 ntBASIC11.83□□□□□ -0.52
Col6a6Q8C6K9 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC11.83□□□□□ -0.52
Col6a6Q8C6K9 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Col6a6Q8C6K9 Gm17208-201ENSMUST00000168388 535 ntBASIC11.83□□□□□ -0.52
Col6a6Q8C6K9 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Col6a6Q8C6K9 Gm29087-201ENSMUST00000186462 645 ntTSL 5 BASIC11.83□□□□□ -0.52
Col6a6Q8C6K9 Gm7593-201ENSMUST00000187246 644 ntBASIC11.83□□□□□ -0.52
Col6a6Q8C6K9 Gm9678-201ENSMUST00000198979 1149 ntBASIC11.83□□□□□ -0.52
Col6a6Q8C6K9 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC11.83□□□□□ -0.52
Col6a6Q8C6K9 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
Col6a6Q8C6K9 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Col6a6Q8C6K9 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Col6a6Q8C6K9 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Col6a6Q8C6K9 Gm44065-201ENSMUST00000203184 3527 ntBASIC11.83□□□□□ -0.52
Col6a6Q8C6K9 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Col6a6Q8C6K9 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Col6a6Q8C6K9 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC11.83□□□□□ -0.52
Col6a6Q8C6K9 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Col6a6Q8C6K9 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Col6a6Q8C6K9 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Col6a6Q8C6K9 Gm16308-201ENSMUST00000162171 940 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Col6a6Q8C6K9 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
Col6a6Q8C6K9 Gm3508-201ENSMUST00000186012 792 ntBASIC11.83□□□□□ -0.52
Col6a6Q8C6K9 AA914427-201ENSMUST00000193194 1166 ntBASIC11.83□□□□□ -0.52
Col6a6Q8C6K9 Gm44551-201ENSMUST00000208804 171 ntBASIC11.83□□□□□ -0.52
Col6a6Q8C6K9 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Col6a6Q8C6K9 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC11.82□□□□□ -0.52
Col6a6Q8C6K9 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Col6a6Q8C6K9 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Col6a6Q8C6K9 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Col6a6Q8C6K9 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Col6a6Q8C6K9 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Col6a6Q8C6K9 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Col6a6Q8C6K9 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Col6a6Q8C6K9 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Col6a6Q8C6K9 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC11.82□□□□□ -0.52
Col6a6Q8C6K9 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Col6a6Q8C6K9 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Col6a6Q8C6K9 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms