Protein–RNA interactions for Protein: Q8C2S0

Usp44, Ubiquitin carboxyl-terminal hydrolase 44, mousemouse

Predictions only

Length 711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp44Q8C2S0 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Usp44Q8C2S0 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Usp44Q8C2S0 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC15.36■□□□□ 0.05
Usp44Q8C2S0 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Usp44Q8C2S0 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Usp44Q8C2S0 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC15.36■□□□□ 0.05
Usp44Q8C2S0 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Usp44Q8C2S0 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Usp44Q8C2S0 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Usp44Q8C2S0 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Usp44Q8C2S0 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Usp44Q8C2S0 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC15.36■□□□□ 0.05
Usp44Q8C2S0 Gm2231-201ENSMUST00000125661 612 ntBASIC15.36■□□□□ 0.05
Usp44Q8C2S0 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC15.36■□□□□ 0.05
Usp44Q8C2S0 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Usp44Q8C2S0 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC15.36■□□□□ 0.05
Usp44Q8C2S0 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Usp44Q8C2S0 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Usp44Q8C2S0 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Usp44Q8C2S0 Gm7029-201ENSMUST00000173226 450 ntBASIC15.36■□□□□ 0.05
Usp44Q8C2S0 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC15.36■□□□□ 0.05
Usp44Q8C2S0 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Usp44Q8C2S0 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC15.36■□□□□ 0.05
Usp44Q8C2S0 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Usp44Q8C2S0 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Usp44Q8C2S0 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC15.36■□□□□ 0.05
Usp44Q8C2S0 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC15.36■□□□□ 0.05
Usp44Q8C2S0 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Usp44Q8C2S0 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Usp44Q8C2S0 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC15.36■□□□□ 0.05
Usp44Q8C2S0 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Usp44Q8C2S0 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Usp44Q8C2S0 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC15.36■□□□□ 0.05
Usp44Q8C2S0 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Usp44Q8C2S0 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC15.35■□□□□ 0.05
Usp44Q8C2S0 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Usp44Q8C2S0 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Usp44Q8C2S0 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Usp44Q8C2S0 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Usp44Q8C2S0 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Usp44Q8C2S0 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Usp44Q8C2S0 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Usp44Q8C2S0 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Usp44Q8C2S0 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Usp44Q8C2S0 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC15.35■□□□□ 0.05
Usp44Q8C2S0 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC15.35■□□□□ 0.05
Usp44Q8C2S0 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Usp44Q8C2S0 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Usp44Q8C2S0 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC15.35■□□□□ 0.05
Usp44Q8C2S0 Cdk7-205ENSMUST00000225990 1159 ntBASIC15.35■□□□□ 0.05
Usp44Q8C2S0 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Usp44Q8C2S0 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Usp44Q8C2S0 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Usp44Q8C2S0 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Usp44Q8C2S0 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC15.35■□□□□ 0.05
Usp44Q8C2S0 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Usp44Q8C2S0 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Usp44Q8C2S0 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC15.35■□□□□ 0.05
Usp44Q8C2S0 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Usp44Q8C2S0 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Usp44Q8C2S0 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Usp44Q8C2S0 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Usp44Q8C2S0 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Usp44Q8C2S0 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Usp44Q8C2S0 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Usp44Q8C2S0 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Usp44Q8C2S0 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Usp44Q8C2S0 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC15.34■□□□□ 0.05
Usp44Q8C2S0 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Usp44Q8C2S0 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Usp44Q8C2S0 Snord83b-201ENSMUST00000104546 94 ntBASIC15.34■□□□□ 0.05
Usp44Q8C2S0 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
Usp44Q8C2S0 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Usp44Q8C2S0 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Usp44Q8C2S0 Ighv8-10-201ENSMUST00000199579 358 ntBASIC15.34■□□□□ 0.05
Usp44Q8C2S0 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Usp44Q8C2S0 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Usp44Q8C2S0 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC15.34■□□□□ 0.05
Usp44Q8C2S0 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC15.34■□□□□ 0.05
Usp44Q8C2S0 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC15.34■□□□□ 0.05
Usp44Q8C2S0 AC132467.2-202ENSMUST00000227726 559 ntBASIC15.34■□□□□ 0.05
Usp44Q8C2S0 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Usp44Q8C2S0 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Usp44Q8C2S0 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC15.34■□□□□ 0.05
Usp44Q8C2S0 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Usp44Q8C2S0 Ksr1-207ENSMUST00000226282 5260 ntBASIC15.34■□□□□ 0.05
Usp44Q8C2S0 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Usp44Q8C2S0 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Usp44Q8C2S0 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Usp44Q8C2S0 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Usp44Q8C2S0 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Usp44Q8C2S0 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Usp44Q8C2S0 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Usp44Q8C2S0 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Usp44Q8C2S0 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Usp44Q8C2S0 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Usp44Q8C2S0 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Usp44Q8C2S0 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
Usp44Q8C2S0 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC15.33■□□□□ 0.05
Usp44Q8C2S0 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms