Protein–RNA interactions for Protein: Q8BTS4

Nup54, Nuclear pore complex protein Nup54, mousemouse

Known RBP Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup54Q8BTS4 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC13.46□□□□□ -0.26
Nup54Q8BTS4 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Nup54Q8BTS4 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
Nup54Q8BTS4 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Nup54Q8BTS4 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Nup54Q8BTS4 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Nup54Q8BTS4 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Nup54Q8BTS4 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Nup54Q8BTS4 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Nup54Q8BTS4 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Nup54Q8BTS4 Gm6198-201ENSMUST00000191337 2929 ntBASIC13.45□□□□□ -0.26
Nup54Q8BTS4 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Nup54Q8BTS4 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Nup54Q8BTS4 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Nup54Q8BTS4 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Nup54Q8BTS4 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC13.45□□□□□ -0.26
Nup54Q8BTS4 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC13.45□□□□□ -0.26
Nup54Q8BTS4 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC13.45□□□□□ -0.26
Nup54Q8BTS4 Gm2639-201ENSMUST00000156881 1297 ntBASIC13.45□□□□□ -0.26
Nup54Q8BTS4 AC126253.1-201ENSMUST00000227974 824 ntBASIC13.45□□□□□ -0.26
Nup54Q8BTS4 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Nup54Q8BTS4 Gm10268-201ENSMUST00000085340 555 ntBASIC13.45□□□□□ -0.26
Nup54Q8BTS4 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Nup54Q8BTS4 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Nup54Q8BTS4 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Nup54Q8BTS4 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC13.45□□□□□ -0.26
Nup54Q8BTS4 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC13.45□□□□□ -0.26
Nup54Q8BTS4 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Nup54Q8BTS4 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Nup54Q8BTS4 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Nup54Q8BTS4 Gm45546-201ENSMUST00000211053 2394 ntBASIC13.45□□□□□ -0.26
Nup54Q8BTS4 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC13.45□□□□□ -0.26
Nup54Q8BTS4 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Nup54Q8BTS4 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Nup54Q8BTS4 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Nup54Q8BTS4 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Nup54Q8BTS4 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Nup54Q8BTS4 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Nup54Q8BTS4 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Nup54Q8BTS4 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Nup54Q8BTS4 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Nup54Q8BTS4 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC13.44□□□□□ -0.26
Nup54Q8BTS4 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Nup54Q8BTS4 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Nup54Q8BTS4 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC13.44□□□□□ -0.26
Nup54Q8BTS4 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Nup54Q8BTS4 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Nup54Q8BTS4 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC13.44□□□□□ -0.26
Nup54Q8BTS4 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Nup54Q8BTS4 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Nup54Q8BTS4 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC13.44□□□□□ -0.26
Nup54Q8BTS4 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Nup54Q8BTS4 AY702102-202ENSMUST00000194651 1173 ntBASIC13.44□□□□□ -0.26
Nup54Q8BTS4 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC13.44□□□□□ -0.26
Nup54Q8BTS4 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC13.44□□□□□ -0.26
Nup54Q8BTS4 AC140451.2-201ENSMUST00000228030 664 ntBASIC13.44□□□□□ -0.26
Nup54Q8BTS4 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Nup54Q8BTS4 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Nup54Q8BTS4 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Nup54Q8BTS4 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Nup54Q8BTS4 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Nup54Q8BTS4 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Nup54Q8BTS4 CT030684.3-201ENSMUST00000227308 2445 ntBASIC13.44□□□□□ -0.26
Nup54Q8BTS4 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Nup54Q8BTS4 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Nup54Q8BTS4 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Nup54Q8BTS4 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC13.44□□□□□ -0.26
Nup54Q8BTS4 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Nup54Q8BTS4 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Nup54Q8BTS4 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC13.44□□□□□ -0.26
Nup54Q8BTS4 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nup54Q8BTS4 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Nup54Q8BTS4 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC13.43□□□□□ -0.26
Nup54Q8BTS4 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
Nup54Q8BTS4 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nup54Q8BTS4 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Nup54Q8BTS4 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nup54Q8BTS4 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC13.43□□□□□ -0.26
Nup54Q8BTS4 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Nup54Q8BTS4 Mir686-201ENSMUST00000102174 109 ntBASIC13.43□□□□□ -0.26
Nup54Q8BTS4 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC13.43□□□□□ -0.26
Nup54Q8BTS4 Gm9025-201ENSMUST00000122415 1575 ntBASIC13.43□□□□□ -0.26
Nup54Q8BTS4 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC13.43□□□□□ -0.26
Nup54Q8BTS4 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Nup54Q8BTS4 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nup54Q8BTS4 Gm44065-201ENSMUST00000203184 3527 ntBASIC13.43□□□□□ -0.26
Nup54Q8BTS4 Tyms-ps-201ENSMUST00000219550 915 ntBASIC13.43□□□□□ -0.26
Nup54Q8BTS4 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nup54Q8BTS4 AC113060.1-201ENSMUST00000225689 1573 ntBASIC13.43□□□□□ -0.26
Nup54Q8BTS4 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nup54Q8BTS4 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nup54Q8BTS4 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nup54Q8BTS4 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nup54Q8BTS4 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nup54Q8BTS4 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Nup54Q8BTS4 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Nup54Q8BTS4 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Nup54Q8BTS4 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Nup54Q8BTS4 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nup54Q8BTS4 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms