Protein–RNA interactions for Protein: Q8BQZ5

Cpsf4, Cleavage and polyadenylation specificity factor subunit 4, mousemouse

Known RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4Q8BQZ5 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Cpsf4Q8BQZ5 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
Cpsf4Q8BQZ5 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
Cpsf4Q8BQZ5 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Cpsf4Q8BQZ5 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Cpsf4Q8BQZ5 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Cpsf4Q8BQZ5 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Cpsf4Q8BQZ5 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Cpsf4Q8BQZ5 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Cpsf4Q8BQZ5 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Cpsf4Q8BQZ5 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC12.77□□□□□ -0.36
Cpsf4Q8BQZ5 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Cpsf4Q8BQZ5 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Cpsf4Q8BQZ5 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC12.77□□□□□ -0.37
Cpsf4Q8BQZ5 Gm7899-201ENSMUST00000192935 1897 ntBASIC12.77□□□□□ -0.37
Cpsf4Q8BQZ5 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cpsf4Q8BQZ5 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cpsf4Q8BQZ5 Gm12485-201ENSMUST00000119641 291 ntBASIC12.77□□□□□ -0.37
Cpsf4Q8BQZ5 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Cpsf4Q8BQZ5 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Cpsf4Q8BQZ5 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC12.77□□□□□ -0.37
Cpsf4Q8BQZ5 Gm27772-201ENSMUST00000184900 187 ntBASIC12.77□□□□□ -0.37
Cpsf4Q8BQZ5 Gm28911-201ENSMUST00000188837 117 ntBASIC12.77□□□□□ -0.37
Cpsf4Q8BQZ5 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC12.77□□□□□ -0.37
Cpsf4Q8BQZ5 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC12.77□□□□□ -0.37
Cpsf4Q8BQZ5 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Cpsf4Q8BQZ5 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cpsf4Q8BQZ5 Gm5186-201ENSMUST00000218781 920 ntBASIC12.77□□□□□ -0.37
Cpsf4Q8BQZ5 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cpsf4Q8BQZ5 AC155252.1-201ENSMUST00000226462 1208 ntBASIC12.77□□□□□ -0.37
Cpsf4Q8BQZ5 AC192088.1-201ENSMUST00000227561 301 ntBASIC12.77□□□□□ -0.37
Cpsf4Q8BQZ5 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cpsf4Q8BQZ5 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Cpsf4Q8BQZ5 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Cpsf4Q8BQZ5 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cpsf4Q8BQZ5 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cpsf4Q8BQZ5 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cpsf4Q8BQZ5 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cpsf4Q8BQZ5 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cpsf4Q8BQZ5 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC12.77□□□□□ -0.37
Cpsf4Q8BQZ5 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Cpsf4Q8BQZ5 Tmed9-203ENSMUST00000224741 1450 ntBASIC12.77□□□□□ -0.37
Cpsf4Q8BQZ5 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Cpsf4Q8BQZ5 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cpsf4Q8BQZ5 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Cpsf4Q8BQZ5 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cpsf4Q8BQZ5 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cpsf4Q8BQZ5 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Cpsf4Q8BQZ5 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cpsf4Q8BQZ5 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Cpsf4Q8BQZ5 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Cpsf4Q8BQZ5 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cpsf4Q8BQZ5 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC12.76□□□□□ -0.37
Cpsf4Q8BQZ5 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Cpsf4Q8BQZ5 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Cpsf4Q8BQZ5 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cpsf4Q8BQZ5 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Cpsf4Q8BQZ5 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cpsf4Q8BQZ5 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cpsf4Q8BQZ5 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Cpsf4Q8BQZ5 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cpsf4Q8BQZ5 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Cpsf4Q8BQZ5 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC12.76□□□□□ -0.37
Cpsf4Q8BQZ5 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cpsf4Q8BQZ5 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Cpsf4Q8BQZ5 Gm27701-201ENSMUST00000184498 110 ntBASIC12.76□□□□□ -0.37
Cpsf4Q8BQZ5 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC12.76□□□□□ -0.37
Cpsf4Q8BQZ5 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC12.76□□□□□ -0.37
Cpsf4Q8BQZ5 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cpsf4Q8BQZ5 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC12.76□□□□□ -0.37
Cpsf4Q8BQZ5 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC12.76□□□□□ -0.37
Cpsf4Q8BQZ5 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Cpsf4Q8BQZ5 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cpsf4Q8BQZ5 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC12.76□□□□□ -0.37
Cpsf4Q8BQZ5 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Cpsf4Q8BQZ5 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Cpsf4Q8BQZ5 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Cpsf4Q8BQZ5 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cpsf4Q8BQZ5 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cpsf4Q8BQZ5 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC12.76□□□□□ -0.37
Cpsf4Q8BQZ5 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Cpsf4Q8BQZ5 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cpsf4Q8BQZ5 Gm43273-201ENSMUST00000199649 2594 ntBASIC12.76□□□□□ -0.37
Cpsf4Q8BQZ5 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cpsf4Q8BQZ5 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cpsf4Q8BQZ5 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Cpsf4Q8BQZ5 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cpsf4Q8BQZ5 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC12.75□□□□□ -0.37
Cpsf4Q8BQZ5 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cpsf4Q8BQZ5 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Cpsf4Q8BQZ5 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cpsf4Q8BQZ5 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cpsf4Q8BQZ5 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cpsf4Q8BQZ5 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC12.75□□□□□ -0.37
Cpsf4Q8BQZ5 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Cpsf4Q8BQZ5 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cpsf4Q8BQZ5 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC12.75□□□□□ -0.37
Cpsf4Q8BQZ5 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Cpsf4Q8BQZ5 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Cpsf4Q8BQZ5 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms