Protein–RNA interactions for Protein: Q8BL00

Cdhr3, Cadherin-related family member 3, mousemouse

Predictions only

Length 831 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdhr3Q8BL00 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Cdhr3Q8BL00 Gm43463-201ENSMUST00000195967 1803 ntBASIC11.49□□□□□ -0.57
Cdhr3Q8BL00 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Cdhr3Q8BL00 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Cdhr3Q8BL00 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cdhr3Q8BL00 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cdhr3Q8BL00 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC11.49□□□□□ -0.57
Cdhr3Q8BL00 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cdhr3Q8BL00 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cdhr3Q8BL00 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC11.49□□□□□ -0.57
Cdhr3Q8BL00 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC11.49□□□□□ -0.57
Cdhr3Q8BL00 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC11.49□□□□□ -0.57
Cdhr3Q8BL00 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Cdhr3Q8BL00 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC11.49□□□□□ -0.57
Cdhr3Q8BL00 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cdhr3Q8BL00 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cdhr3Q8BL00 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC11.49□□□□□ -0.57
Cdhr3Q8BL00 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cdhr3Q8BL00 Gm9522-201ENSMUST00000182394 926 ntBASIC11.49□□□□□ -0.57
Cdhr3Q8BL00 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC11.49□□□□□ -0.57
Cdhr3Q8BL00 Gm29608-201ENSMUST00000190444 463 ntBASIC11.49□□□□□ -0.57
Cdhr3Q8BL00 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC11.49□□□□□ -0.57
Cdhr3Q8BL00 Gm43094-201ENSMUST00000196549 921 ntBASIC11.49□□□□□ -0.57
Cdhr3Q8BL00 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Cdhr3Q8BL00 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC11.49□□□□□ -0.57
Cdhr3Q8BL00 AC165157.4-201ENSMUST00000220587 139 ntBASIC11.49□□□□□ -0.57
Cdhr3Q8BL00 AC093022.5-201ENSMUST00000226841 1079 ntBASIC11.49□□□□□ -0.57
Cdhr3Q8BL00 AC132467.2-202ENSMUST00000227726 559 ntBASIC11.49□□□□□ -0.57
Cdhr3Q8BL00 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cdhr3Q8BL00 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Cdhr3Q8BL00 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cdhr3Q8BL00 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cdhr3Q8BL00 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cdhr3Q8BL00 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Cdhr3Q8BL00 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cdhr3Q8BL00 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cdhr3Q8BL00 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC11.49□□□□□ -0.57
Cdhr3Q8BL00 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC11.49□□□□□ -0.57
Cdhr3Q8BL00 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cdhr3Q8BL00 Gm9025-201ENSMUST00000122415 1575 ntBASIC11.49□□□□□ -0.57
Cdhr3Q8BL00 AC113060.1-201ENSMUST00000225689 1573 ntBASIC11.49□□□□□ -0.57
Cdhr3Q8BL00 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cdhr3Q8BL00 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC11.49□□□□□ -0.57
Cdhr3Q8BL00 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cdhr3Q8BL00 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cdhr3Q8BL00 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Cdhr3Q8BL00 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cdhr3Q8BL00 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Cdhr3Q8BL00 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cdhr3Q8BL00 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cdhr3Q8BL00 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC11.48□□□□□ -0.57
Cdhr3Q8BL00 Gm42748-201ENSMUST00000199354 2341 ntBASIC11.48□□□□□ -0.57
Cdhr3Q8BL00 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cdhr3Q8BL00 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cdhr3Q8BL00 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Cdhr3Q8BL00 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cdhr3Q8BL00 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC11.48□□□□□ -0.57
Cdhr3Q8BL00 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cdhr3Q8BL00 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC11.48□□□□□ -0.57
Cdhr3Q8BL00 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Cdhr3Q8BL00 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cdhr3Q8BL00 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Cdhr3Q8BL00 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Cdhr3Q8BL00 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cdhr3Q8BL00 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC11.48□□□□□ -0.57
Cdhr3Q8BL00 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC11.48□□□□□ -0.57
Cdhr3Q8BL00 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cdhr3Q8BL00 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Cdhr3Q8BL00 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC11.48□□□□□ -0.57
Cdhr3Q8BL00 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cdhr3Q8BL00 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC11.48□□□□□ -0.57
Cdhr3Q8BL00 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cdhr3Q8BL00 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC11.48□□□□□ -0.57
Cdhr3Q8BL00 AC139580.1-202ENSMUST00000223574 928 ntBASIC11.48□□□□□ -0.57
Cdhr3Q8BL00 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cdhr3Q8BL00 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cdhr3Q8BL00 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cdhr3Q8BL00 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cdhr3Q8BL00 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Cdhr3Q8BL00 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cdhr3Q8BL00 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cdhr3Q8BL00 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cdhr3Q8BL00 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC11.48□□□□□ -0.57
Cdhr3Q8BL00 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Cdhr3Q8BL00 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cdhr3Q8BL00 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Cdhr3Q8BL00 Gm5422-201ENSMUST00000050717 2721 ntBASIC11.48□□□□□ -0.57
Cdhr3Q8BL00 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Cdhr3Q8BL00 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cdhr3Q8BL00 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC11.48□□□□□ -0.57
Cdhr3Q8BL00 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Cdhr3Q8BL00 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cdhr3Q8BL00 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cdhr3Q8BL00 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Cdhr3Q8BL00 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cdhr3Q8BL00 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Cdhr3Q8BL00 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cdhr3Q8BL00 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cdhr3Q8BL00 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Cdhr3Q8BL00 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms