Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 AC154725.1-201ENSMUST00000224826 1961 ntBASIC13.78□□□□□ -0.2
Ccdc40Q8BI79 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ccdc40Q8BI79 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Ccdc40Q8BI79 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ccdc40Q8BI79 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Ccdc40Q8BI79 Dach2-201ENSMUST00000067219 2520 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ccdc40Q8BI79 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Ccdc40Q8BI79 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.2
Ccdc40Q8BI79 Gm26616-202ENSMUST00000195676 3107 ntBASIC13.77□□□□□ -0.2
Ccdc40Q8BI79 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Ccdc40Q8BI79 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ccdc40Q8BI79 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ccdc40Q8BI79 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ccdc40Q8BI79 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ccdc40Q8BI79 Gm11524-201ENSMUST00000119349 807 ntBASIC13.77□□□□□ -0.21
Ccdc40Q8BI79 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ccdc40Q8BI79 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC13.77□□□□□ -0.21
Ccdc40Q8BI79 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Ccdc40Q8BI79 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Ccdc40Q8BI79 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ccdc40Q8BI79 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC13.77□□□□□ -0.21
Ccdc40Q8BI79 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Ccdc40Q8BI79 Gm31326-201ENSMUST00000191856 1048 ntBASIC13.77□□□□□ -0.21
Ccdc40Q8BI79 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC13.77□□□□□ -0.21
Ccdc40Q8BI79 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Ccdc40Q8BI79 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Ccdc40Q8BI79 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Ccdc40Q8BI79 Gm19078-201ENSMUST00000206311 727 ntBASIC13.77□□□□□ -0.21
Ccdc40Q8BI79 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Ccdc40Q8BI79 AC155258.1-201ENSMUST00000219303 253 ntBASIC13.77□□□□□ -0.21
Ccdc40Q8BI79 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ccdc40Q8BI79 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Ccdc40Q8BI79 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ccdc40Q8BI79 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ccdc40Q8BI79 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ccdc40Q8BI79 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ccdc40Q8BI79 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ccdc40Q8BI79 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ccdc40Q8BI79 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC13.77□□□□□ -0.21
Ccdc40Q8BI79 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ccdc40Q8BI79 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ccdc40Q8BI79 G6pdx-201ENSMUST00000004327 2652 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ccdc40Q8BI79 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Ccdc40Q8BI79 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ccdc40Q8BI79 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ccdc40Q8BI79 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ccdc40Q8BI79 Klhl14-201ENSMUST00000049105 4018 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ccdc40Q8BI79 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC13.76□□□□□ -0.21
Ccdc40Q8BI79 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ccdc40Q8BI79 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Ccdc40Q8BI79 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Ccdc40Q8BI79 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Ccdc40Q8BI79 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ccdc40Q8BI79 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Ccdc40Q8BI79 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ccdc40Q8BI79 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ccdc40Q8BI79 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Ccdc40Q8BI79 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ccdc40Q8BI79 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ccdc40Q8BI79 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC13.76□□□□□ -0.21
Ccdc40Q8BI79 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC13.76□□□□□ -0.21
Ccdc40Q8BI79 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC13.76□□□□□ -0.21
Ccdc40Q8BI79 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
Ccdc40Q8BI79 Gm26464-201ENSMUST00000157094 305 ntBASIC13.76□□□□□ -0.21
Ccdc40Q8BI79 Gm5354-201ENSMUST00000182417 973 ntBASIC13.76□□□□□ -0.21
Ccdc40Q8BI79 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Ccdc40Q8BI79 Gm43094-201ENSMUST00000196549 921 ntBASIC13.76□□□□□ -0.21
Ccdc40Q8BI79 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Ccdc40Q8BI79 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC13.76□□□□□ -0.21
Ccdc40Q8BI79 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC13.76□□□□□ -0.21
Ccdc40Q8BI79 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ccdc40Q8BI79 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Ccdc40Q8BI79 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ccdc40Q8BI79 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ccdc40Q8BI79 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC13.76□□□□□ -0.21
Ccdc40Q8BI79 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ccdc40Q8BI79 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ccdc40Q8BI79 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ccdc40Q8BI79 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Ccdc40Q8BI79 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ccdc40Q8BI79 AC238940.1-201ENSMUST00000225106 1858 ntBASIC13.76□□□□□ -0.21
Ccdc40Q8BI79 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Ccdc40Q8BI79 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ccdc40Q8BI79 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Ccdc40Q8BI79 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ccdc40Q8BI79 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ccdc40Q8BI79 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
Ccdc40Q8BI79 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ccdc40Q8BI79 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ccdc40Q8BI79 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
Ccdc40Q8BI79 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC13.75□□□□□ -0.21
Ccdc40Q8BI79 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC13.75□□□□□ -0.21
Ccdc40Q8BI79 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ccdc40Q8BI79 Gm16215-201ENSMUST00000161990 637 ntBASIC13.75□□□□□ -0.21
Ccdc40Q8BI79 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC13.75□□□□□ -0.21
Ccdc40Q8BI79 AC124732.1-201ENSMUST00000221551 910 ntBASIC13.75□□□□□ -0.21
Ccdc40Q8BI79 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ccdc40Q8BI79 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ccdc40Q8BI79 Gm37795-201ENSMUST00000194216 2459 ntBASIC13.75□□□□□ -0.21
Ccdc40Q8BI79 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 58.2 ms