Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Prpf38bQ80SY5 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Prpf38bQ80SY5 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC13.81□□□□□ -0.2
Prpf38bQ80SY5 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC13.81□□□□□ -0.2
Prpf38bQ80SY5 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Prpf38bQ80SY5 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Prpf38bQ80SY5 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Prpf38bQ80SY5 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Prpf38bQ80SY5 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Prpf38bQ80SY5 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC13.81□□□□□ -0.2
Prpf38bQ80SY5 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Prpf38bQ80SY5 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Prpf38bQ80SY5 Gm10728-201ENSMUST00000194292 1829 ntBASIC13.8□□□□□ -0.2
Prpf38bQ80SY5 Gm38577-201ENSMUST00000221531 4545 ntBASIC13.8□□□□□ -0.2
Prpf38bQ80SY5 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Prpf38bQ80SY5 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Prpf38bQ80SY5 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC13.8□□□□□ -0.2
Prpf38bQ80SY5 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Prpf38bQ80SY5 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Prpf38bQ80SY5 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Prpf38bQ80SY5 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Prpf38bQ80SY5 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Prpf38bQ80SY5 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Prpf38bQ80SY5 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Prpf38bQ80SY5 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Prpf38bQ80SY5 Gm13689-201ENSMUST00000119360 685 ntBASIC13.8□□□□□ -0.2
Prpf38bQ80SY5 Gm4819-201ENSMUST00000182170 1009 ntBASIC13.8□□□□□ -0.2
Prpf38bQ80SY5 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Prpf38bQ80SY5 Ighv1-62-201ENSMUST00000193406 350 ntBASIC13.8□□□□□ -0.2
Prpf38bQ80SY5 Gm38158-201ENSMUST00000194617 339 ntBASIC13.8□□□□□ -0.2
Prpf38bQ80SY5 Gm42997-202ENSMUST00000200321 985 ntBASIC13.8□□□□□ -0.2
Prpf38bQ80SY5 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC13.8□□□□□ -0.2
Prpf38bQ80SY5 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC13.8□□□□□ -0.2
Prpf38bQ80SY5 Abhd11os-203ENSMUST00000222613 363 ntBASIC13.8□□□□□ -0.2
Prpf38bQ80SY5 AC166997.1-201ENSMUST00000225122 572 ntBASIC13.8□□□□□ -0.2
Prpf38bQ80SY5 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Prpf38bQ80SY5 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Prpf38bQ80SY5 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Prpf38bQ80SY5 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Prpf38bQ80SY5 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Prpf38bQ80SY5 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC13.8□□□□□ -0.2
Prpf38bQ80SY5 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Prpf38bQ80SY5 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Prpf38bQ80SY5 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Prpf38bQ80SY5 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Prpf38bQ80SY5 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
Prpf38bQ80SY5 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Prpf38bQ80SY5 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Prpf38bQ80SY5 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Prpf38bQ80SY5 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Prpf38bQ80SY5 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Prpf38bQ80SY5 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Prpf38bQ80SY5 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC13.8□□□□□ -0.2
Prpf38bQ80SY5 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC13.8□□□□□ -0.2
Prpf38bQ80SY5 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Prpf38bQ80SY5 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Prpf38bQ80SY5 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Prpf38bQ80SY5 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Prpf38bQ80SY5 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Prpf38bQ80SY5 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Prpf38bQ80SY5 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Prpf38bQ80SY5 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC13.79□□□□□ -0.2
Prpf38bQ80SY5 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Prpf38bQ80SY5 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Prpf38bQ80SY5 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Prpf38bQ80SY5 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Prpf38bQ80SY5 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Prpf38bQ80SY5 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC13.79□□□□□ -0.2
Prpf38bQ80SY5 Gm15376-201ENSMUST00000122258 783 ntBASIC13.79□□□□□ -0.2
Prpf38bQ80SY5 Gm13786-201ENSMUST00000122371 333 ntBASIC13.79□□□□□ -0.2
Prpf38bQ80SY5 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Prpf38bQ80SY5 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC13.79□□□□□ -0.2
Prpf38bQ80SY5 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Prpf38bQ80SY5 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC13.79□□□□□ -0.2
Prpf38bQ80SY5 Gm8810-201ENSMUST00000172895 754 ntBASIC13.79□□□□□ -0.2
Prpf38bQ80SY5 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC13.79□□□□□ -0.2
Prpf38bQ80SY5 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
Prpf38bQ80SY5 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC13.79□□□□□ -0.2
Prpf38bQ80SY5 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Prpf38bQ80SY5 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC13.79□□□□□ -0.2
Prpf38bQ80SY5 CT030182.1-201ENSMUST00000225935 533 ntBASIC13.79□□□□□ -0.2
Prpf38bQ80SY5 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Prpf38bQ80SY5 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Prpf38bQ80SY5 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Prpf38bQ80SY5 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Prpf38bQ80SY5 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Prpf38bQ80SY5 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Prpf38bQ80SY5 Gm21038-201ENSMUST00000222205 1383 ntBASIC13.79□□□□□ -0.2
Prpf38bQ80SY5 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Prpf38bQ80SY5 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Prpf38bQ80SY5 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Prpf38bQ80SY5 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Prpf38bQ80SY5 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Prpf38bQ80SY5 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Prpf38bQ80SY5 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Prpf38bQ80SY5 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Prpf38bQ80SY5 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Prpf38bQ80SY5 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Prpf38bQ80SY5 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Prpf38bQ80SY5 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 53.8 ms