Protein–RNA interactions for Protein: Q7TSK3

Pcdh8, Protocadherin-8, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh8Q7TSK3 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Pcdh8Q7TSK3 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdh8Q7TSK3 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdh8Q7TSK3 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC12.99□□□□□ -0.33
Pcdh8Q7TSK3 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdh8Q7TSK3 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC12.99□□□□□ -0.33
Pcdh8Q7TSK3 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC12.99□□□□□ -0.33
Pcdh8Q7TSK3 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdh8Q7TSK3 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdh8Q7TSK3 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdh8Q7TSK3 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdh8Q7TSK3 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdh8Q7TSK3 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdh8Q7TSK3 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC12.99□□□□□ -0.33
Pcdh8Q7TSK3 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdh8Q7TSK3 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdh8Q7TSK3 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdh8Q7TSK3 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdh8Q7TSK3 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdh8Q7TSK3 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdh8Q7TSK3 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdh8Q7TSK3 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC12.98□□□□□ -0.33
Pcdh8Q7TSK3 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdh8Q7TSK3 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdh8Q7TSK3 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdh8Q7TSK3 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdh8Q7TSK3 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdh8Q7TSK3 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdh8Q7TSK3 Gm37861-201ENSMUST00000193534 2869 ntBASIC12.98□□□□□ -0.33
Pcdh8Q7TSK3 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdh8Q7TSK3 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Pcdh8Q7TSK3 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdh8Q7TSK3 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC12.98□□□□□ -0.33
Pcdh8Q7TSK3 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdh8Q7TSK3 Gm14350-201ENSMUST00000116642 640 ntBASIC12.98□□□□□ -0.33
Pcdh8Q7TSK3 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC12.98□□□□□ -0.33
Pcdh8Q7TSK3 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC12.98□□□□□ -0.33
Pcdh8Q7TSK3 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdh8Q7TSK3 Gm37497-201ENSMUST00000195830 798 ntBASIC12.98□□□□□ -0.33
Pcdh8Q7TSK3 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC12.98□□□□□ -0.33
Pcdh8Q7TSK3 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdh8Q7TSK3 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdh8Q7TSK3 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdh8Q7TSK3 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdh8Q7TSK3 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdh8Q7TSK3 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdh8Q7TSK3 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Pcdh8Q7TSK3 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdh8Q7TSK3 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdh8Q7TSK3 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdh8Q7TSK3 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdh8Q7TSK3 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdh8Q7TSK3 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdh8Q7TSK3 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdh8Q7TSK3 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdh8Q7TSK3 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdh8Q7TSK3 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdh8Q7TSK3 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdh8Q7TSK3 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Pcdh8Q7TSK3 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdh8Q7TSK3 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC12.97□□□□□ -0.33
Pcdh8Q7TSK3 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdh8Q7TSK3 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdh8Q7TSK3 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdh8Q7TSK3 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdh8Q7TSK3 Gm18222-201ENSMUST00000202416 1387 ntBASIC12.97□□□□□ -0.33
Pcdh8Q7TSK3 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdh8Q7TSK3 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdh8Q7TSK3 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdh8Q7TSK3 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdh8Q7TSK3 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdh8Q7TSK3 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdh8Q7TSK3 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC12.97□□□□□ -0.33
Pcdh8Q7TSK3 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Pcdh8Q7TSK3 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdh8Q7TSK3 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdh8Q7TSK3 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdh8Q7TSK3 Gm23931-201ENSMUST00000103842 109 ntBASIC12.97□□□□□ -0.33
Pcdh8Q7TSK3 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC12.97□□□□□ -0.33
Pcdh8Q7TSK3 Gm16202-201ENSMUST00000117532 544 ntBASIC12.97□□□□□ -0.33
Pcdh8Q7TSK3 Gm5940-201ENSMUST00000117582 1068 ntBASIC12.97□□□□□ -0.33
Pcdh8Q7TSK3 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC12.97□□□□□ -0.33
Pcdh8Q7TSK3 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdh8Q7TSK3 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdh8Q7TSK3 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdh8Q7TSK3 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC12.97□□□□□ -0.33
Pcdh8Q7TSK3 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdh8Q7TSK3 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC12.97□□□□□ -0.33
Pcdh8Q7TSK3 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC12.97□□□□□ -0.33
Pcdh8Q7TSK3 Gm44064-201ENSMUST00000204964 1087 ntBASIC12.97□□□□□ -0.33
Pcdh8Q7TSK3 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdh8Q7TSK3 Gm6013-201ENSMUST00000212264 699 ntBASIC12.97□□□□□ -0.33
Pcdh8Q7TSK3 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdh8Q7TSK3 AC134254.1-201ENSMUST00000221362 167 ntBASIC12.97□□□□□ -0.33
Pcdh8Q7TSK3 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdh8Q7TSK3 Gm7399-201ENSMUST00000032395 858 ntBASIC12.97□□□□□ -0.33
Pcdh8Q7TSK3 Gm10146-201ENSMUST00000072739 309 ntBASIC12.97□□□□□ -0.33
Pcdh8Q7TSK3 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Pcdh8Q7TSK3 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdh8Q7TSK3 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC12.97□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms