Protein–RNA interactions for Protein: Q6PFF0

Scaf4, SR-related CTD-associated factor 4, mousemouse

Known RBP Predictions only

Length 1,209 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4Q6PFF0 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Scaf4Q6PFF0 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Scaf4Q6PFF0 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Scaf4Q6PFF0 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Scaf4Q6PFF0 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Scaf4Q6PFF0 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Scaf4Q6PFF0 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Scaf4Q6PFF0 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Scaf4Q6PFF0 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC12.97□□□□□ -0.33
Scaf4Q6PFF0 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Scaf4Q6PFF0 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC12.97□□□□□ -0.33
Scaf4Q6PFF0 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Scaf4Q6PFF0 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC12.97□□□□□ -0.33
Scaf4Q6PFF0 Gm37277-201ENSMUST00000194052 1111 ntBASIC12.97□□□□□ -0.33
Scaf4Q6PFF0 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC12.97□□□□□ -0.33
Scaf4Q6PFF0 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Scaf4Q6PFF0 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Scaf4Q6PFF0 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC12.97□□□□□ -0.33
Scaf4Q6PFF0 Gm17795-201ENSMUST00000214505 757 ntBASIC12.97□□□□□ -0.33
Scaf4Q6PFF0 Chchd1-203ENSMUST00000224633 557 ntBASIC12.97□□□□□ -0.33
Scaf4Q6PFF0 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Scaf4Q6PFF0 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Scaf4Q6PFF0 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Scaf4Q6PFF0 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Scaf4Q6PFF0 CT009757.3-201ENSMUST00000223367 2320 ntBASIC12.97□□□□□ -0.33
Scaf4Q6PFF0 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Scaf4Q6PFF0 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Scaf4Q6PFF0 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Scaf4Q6PFF0 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Scaf4Q6PFF0 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Scaf4Q6PFF0 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Scaf4Q6PFF0 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Scaf4Q6PFF0 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Scaf4Q6PFF0 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC12.97□□□□□ -0.33
Scaf4Q6PFF0 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Scaf4Q6PFF0 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Scaf4Q6PFF0 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Scaf4Q6PFF0 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Scaf4Q6PFF0 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Scaf4Q6PFF0 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Scaf4Q6PFF0 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Scaf4Q6PFF0 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC12.96□□□□□ -0.33
Scaf4Q6PFF0 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Scaf4Q6PFF0 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Scaf4Q6PFF0 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Scaf4Q6PFF0 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Scaf4Q6PFF0 Gm45266-201ENSMUST00000210111 2173 ntBASIC12.96□□□□□ -0.33
Scaf4Q6PFF0 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Scaf4Q6PFF0 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Scaf4Q6PFF0 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Scaf4Q6PFF0 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC12.96□□□□□ -0.33
Scaf4Q6PFF0 Gm38294-201ENSMUST00000192831 381 ntBASIC12.96□□□□□ -0.33
Scaf4Q6PFF0 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC12.96□□□□□ -0.33
Scaf4Q6PFF0 Gm7390-201ENSMUST00000212452 1216 ntBASIC12.96□□□□□ -0.33
Scaf4Q6PFF0 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC12.96□□□□□ -0.33
Scaf4Q6PFF0 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Scaf4Q6PFF0 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Scaf4Q6PFF0 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Scaf4Q6PFF0 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Scaf4Q6PFF0 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Scaf4Q6PFF0 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Scaf4Q6PFF0 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC12.96□□□□□ -0.34
Scaf4Q6PFF0 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Scaf4Q6PFF0 Zfp125-201ENSMUST00000079237 2488 ntBASIC12.96□□□□□ -0.34
Scaf4Q6PFF0 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Scaf4Q6PFF0 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC12.96□□□□□ -0.34
Scaf4Q6PFF0 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Scaf4Q6PFF0 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Scaf4Q6PFF0 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Scaf4Q6PFF0 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Scaf4Q6PFF0 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Scaf4Q6PFF0 AC154767.3-201ENSMUST00000225150 1342 ntBASIC12.95□□□□□ -0.34
Scaf4Q6PFF0 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC12.95□□□□□ -0.34
Scaf4Q6PFF0 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Scaf4Q6PFF0 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Scaf4Q6PFF0 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Scaf4Q6PFF0 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Scaf4Q6PFF0 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Scaf4Q6PFF0 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC12.95□□□□□ -0.34
Scaf4Q6PFF0 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Scaf4Q6PFF0 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC12.95□□□□□ -0.34
Scaf4Q6PFF0 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC12.95□□□□□ -0.34
Scaf4Q6PFF0 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC12.95□□□□□ -0.34
Scaf4Q6PFF0 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Scaf4Q6PFF0 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Scaf4Q6PFF0 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Scaf4Q6PFF0 Gm27618-201ENSMUST00000183671 60 ntBASIC12.95□□□□□ -0.34
Scaf4Q6PFF0 Gm38144-201ENSMUST00000192790 465 ntBASIC12.95□□□□□ -0.34
Scaf4Q6PFF0 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC12.95□□□□□ -0.34
Scaf4Q6PFF0 CT943659.1-201ENSMUST00000215459 326 ntBASIC12.95□□□□□ -0.34
Scaf4Q6PFF0 AC159114.1-201ENSMUST00000220349 266 ntBASIC12.95□□□□□ -0.34
Scaf4Q6PFF0 AC134335.2-201ENSMUST00000227660 440 ntBASIC12.95□□□□□ -0.34
Scaf4Q6PFF0 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Scaf4Q6PFF0 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Scaf4Q6PFF0 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Scaf4Q6PFF0 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Scaf4Q6PFF0 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Scaf4Q6PFF0 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Scaf4Q6PFF0 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Scaf4Q6PFF0 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 64 ms