Protein–RNA interactions for Protein: Q6PE01

Snrnp40, U5 small nuclear ribonucleoprotein 40 kDa protein, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp40Q6PE01 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Snrnp40Q6PE01 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Snrnp40Q6PE01 Gm6254-201ENSMUST00000168178 1072 ntBASIC11.53□□□□□ -0.56
Snrnp40Q6PE01 Gm6153-201ENSMUST00000172004 1058 ntBASIC11.53□□□□□ -0.56
Snrnp40Q6PE01 Gm24514-201ENSMUST00000174961 285 ntBASIC11.53□□□□□ -0.56
Snrnp40Q6PE01 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Snrnp40Q6PE01 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Snrnp40Q6PE01 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC11.53□□□□□ -0.56
Snrnp40Q6PE01 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC11.53□□□□□ -0.56
Snrnp40Q6PE01 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Snrnp40Q6PE01 Gm5641-202ENSMUST00000198699 1080 ntBASIC11.53□□□□□ -0.56
Snrnp40Q6PE01 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Snrnp40Q6PE01 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC11.53□□□□□ -0.56
Snrnp40Q6PE01 AC161537.1-201ENSMUST00000226199 1015 ntBASIC11.53□□□□□ -0.56
Snrnp40Q6PE01 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Snrnp40Q6PE01 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Snrnp40Q6PE01 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Snrnp40Q6PE01 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Snrnp40Q6PE01 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC11.53□□□□□ -0.56
Snrnp40Q6PE01 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Snrnp40Q6PE01 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Snrnp40Q6PE01 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Snrnp40Q6PE01 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Snrnp40Q6PE01 Crry-ps-201ENSMUST00000079090 1309 ntBASIC11.53□□□□□ -0.56
Snrnp40Q6PE01 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Snrnp40Q6PE01 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Snrnp40Q6PE01 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Snrnp40Q6PE01 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Snrnp40Q6PE01 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Snrnp40Q6PE01 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Snrnp40Q6PE01 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Snrnp40Q6PE01 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Snrnp40Q6PE01 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Snrnp40Q6PE01 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC11.52□□□□□ -0.56
Snrnp40Q6PE01 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC11.52□□□□□ -0.56
Snrnp40Q6PE01 Cyp4f16-208ENSMUST00000169591 2242 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Snrnp40Q6PE01 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC11.52□□□□□ -0.56
Snrnp40Q6PE01 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.56
Snrnp40Q6PE01 Gm45133-201ENSMUST00000207548 2773 ntBASIC11.52□□□□□ -0.56
Snrnp40Q6PE01 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Snrnp40Q6PE01 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Snrnp40Q6PE01 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.56
Snrnp40Q6PE01 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC11.52□□□□□ -0.56
Snrnp40Q6PE01 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Snrnp40Q6PE01 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Snrnp40Q6PE01 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Snrnp40Q6PE01 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Snrnp40Q6PE01 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Snrnp40Q6PE01 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC11.52□□□□□ -0.57
Snrnp40Q6PE01 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Snrnp40Q6PE01 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC11.52□□□□□ -0.57
Snrnp40Q6PE01 Gm14109-201ENSMUST00000118814 309 ntBASIC11.52□□□□□ -0.57
Snrnp40Q6PE01 Gm13875-201ENSMUST00000120162 282 ntBASIC11.52□□□□□ -0.57
Snrnp40Q6PE01 Olfr647-ps1-201ENSMUST00000121599 960 ntBASIC11.52□□□□□ -0.57
Snrnp40Q6PE01 1700084C06Rik-201ENSMUST00000135674 750 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Snrnp40Q6PE01 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Snrnp40Q6PE01 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Snrnp40Q6PE01 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Snrnp40Q6PE01 Gm3096-201ENSMUST00000185770 364 ntBASIC11.52□□□□□ -0.57
Snrnp40Q6PE01 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC11.52□□□□□ -0.57
Snrnp40Q6PE01 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC11.52□□□□□ -0.57
Snrnp40Q6PE01 AC154595.3-201ENSMUST00000224579 384 ntBASIC11.52□□□□□ -0.57
Snrnp40Q6PE01 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC11.52□□□□□ -0.57
Snrnp40Q6PE01 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Snrnp40Q6PE01 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Snrnp40Q6PE01 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC11.52□□□□□ -0.57
Snrnp40Q6PE01 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Snrnp40Q6PE01 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Snrnp40Q6PE01 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC11.52□□□□□ -0.57
Snrnp40Q6PE01 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC11.52□□□□□ -0.57
Snrnp40Q6PE01 Slamf7-204ENSMUST00000194531 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Snrnp40Q6PE01 Gm37737-201ENSMUST00000195013 1638 ntBASIC11.52□□□□□ -0.57
Snrnp40Q6PE01 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC11.52□□□□□ -0.57
Snrnp40Q6PE01 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Snrnp40Q6PE01 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Snrnp40Q6PE01 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Snrnp40Q6PE01 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Snrnp40Q6PE01 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Snrnp40Q6PE01 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Snrnp40Q6PE01 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Snrnp40Q6PE01 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Snrnp40Q6PE01 CT009713.10-201ENSMUST00000225013 1986 ntBASIC11.52□□□□□ -0.57
Snrnp40Q6PE01 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC11.52□□□□□ -0.57
Snrnp40Q6PE01 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC11.52□□□□□ -0.57
Snrnp40Q6PE01 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Snrnp40Q6PE01 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Snrnp40Q6PE01 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Snrnp40Q6PE01 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC11.52□□□□□ -0.57
Snrnp40Q6PE01 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Snrnp40Q6PE01 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Snrnp40Q6PE01 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Snrnp40Q6PE01 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Snrnp40Q6PE01 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Snrnp40Q6PE01 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Snrnp40Q6PE01 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Snrnp40Q6PE01 Gm11960-202ENSMUST00000181063 2858 ntBASIC11.51□□□□□ -0.57
Snrnp40Q6PE01 Sun1-203ENSMUST00000100517 1522 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Snrnp40Q6PE01 Gm14371-201ENSMUST00000138925 1518 ntBASIC11.51□□□□□ -0.57
Snrnp40Q6PE01 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Snrnp40Q6PE01 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 71.4 ms