Protein–RNA interactions for Protein: Q6P2L7

Casc4, Protein CASC4, mousemouse

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Casc4Q6P2L7 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Casc4Q6P2L7 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Casc4Q6P2L7 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Casc4Q6P2L7 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC13.34□□□□□ -0.27
Casc4Q6P2L7 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Casc4Q6P2L7 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Casc4Q6P2L7 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Casc4Q6P2L7 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Casc4Q6P2L7 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.27
Casc4Q6P2L7 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Casc4Q6P2L7 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Casc4Q6P2L7 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Casc4Q6P2L7 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Casc4Q6P2L7 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Casc4Q6P2L7 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Casc4Q6P2L7 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC13.33□□□□□ -0.27
Casc4Q6P2L7 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Casc4Q6P2L7 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Casc4Q6P2L7 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Casc4Q6P2L7 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC13.33□□□□□ -0.28
Casc4Q6P2L7 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Casc4Q6P2L7 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Casc4Q6P2L7 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Casc4Q6P2L7 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Casc4Q6P2L7 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Casc4Q6P2L7 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Casc4Q6P2L7 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Casc4Q6P2L7 Gm11400-201ENSMUST00000120853 1214 ntBASIC13.33□□□□□ -0.28
Casc4Q6P2L7 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC13.33□□□□□ -0.28
Casc4Q6P2L7 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Casc4Q6P2L7 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Casc4Q6P2L7 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Casc4Q6P2L7 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Casc4Q6P2L7 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Casc4Q6P2L7 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Casc4Q6P2L7 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Casc4Q6P2L7 Tmed9-203ENSMUST00000224741 1450 ntBASIC13.33□□□□□ -0.28
Casc4Q6P2L7 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Casc4Q6P2L7 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Casc4Q6P2L7 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Casc4Q6P2L7 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Casc4Q6P2L7 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Casc4Q6P2L7 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Casc4Q6P2L7 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC13.33□□□□□ -0.28
Casc4Q6P2L7 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Casc4Q6P2L7 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Casc4Q6P2L7 Gm45638-201ENSMUST00000211507 2878 ntBASIC13.33□□□□□ -0.28
Casc4Q6P2L7 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC13.33□□□□□ -0.28
Casc4Q6P2L7 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Casc4Q6P2L7 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Casc4Q6P2L7 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Casc4Q6P2L7 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Casc4Q6P2L7 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Casc4Q6P2L7 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Casc4Q6P2L7 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Casc4Q6P2L7 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC13.32□□□□□ -0.28
Casc4Q6P2L7 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Casc4Q6P2L7 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Casc4Q6P2L7 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Casc4Q6P2L7 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Casc4Q6P2L7 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Casc4Q6P2L7 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Casc4Q6P2L7 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Casc4Q6P2L7 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Casc4Q6P2L7 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC13.32□□□□□ -0.28
Casc4Q6P2L7 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Casc4Q6P2L7 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Casc4Q6P2L7 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Casc4Q6P2L7 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Casc4Q6P2L7 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Casc4Q6P2L7 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Casc4Q6P2L7 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Casc4Q6P2L7 Gm5687-201ENSMUST00000118252 640 ntBASIC13.32□□□□□ -0.28
Casc4Q6P2L7 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC13.32□□□□□ -0.28
Casc4Q6P2L7 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Casc4Q6P2L7 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC13.32□□□□□ -0.28
Casc4Q6P2L7 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Casc4Q6P2L7 Gm6244-201ENSMUST00000178732 841 ntBASIC13.32□□□□□ -0.28
Casc4Q6P2L7 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC13.32□□□□□ -0.28
Casc4Q6P2L7 Gm27892-201ENSMUST00000185017 106 ntBASIC13.32□□□□□ -0.28
Casc4Q6P2L7 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC13.32□□□□□ -0.28
Casc4Q6P2L7 Gm7287-201ENSMUST00000205267 602 ntBASIC13.32□□□□□ -0.28
Casc4Q6P2L7 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC13.32□□□□□ -0.28
Casc4Q6P2L7 AC110817.1-201ENSMUST00000225706 605 ntBASIC13.32□□□□□ -0.28
Casc4Q6P2L7 Itm2b-204ENSMUST00000228637 783 ntBASIC13.32□□□□□ -0.28
Casc4Q6P2L7 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Casc4Q6P2L7 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Casc4Q6P2L7 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC13.32□□□□□ -0.28
Casc4Q6P2L7 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Casc4Q6P2L7 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Casc4Q6P2L7 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Casc4Q6P2L7 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC13.32□□□□□ -0.28
Casc4Q6P2L7 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Casc4Q6P2L7 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Casc4Q6P2L7 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Casc4Q6P2L7 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC13.31□□□□□ -0.28
Casc4Q6P2L7 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Casc4Q6P2L7 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Casc4Q6P2L7 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Casc4Q6P2L7 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms