Protein–RNA interactions for Protein: Q64347

Clcn1, Chloride channel protein 1, mousemouse

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn1Q64347 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Clcn1Q64347 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Clcn1Q64347 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Clcn1Q64347 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Clcn1Q64347 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Clcn1Q64347 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Clcn1Q64347 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Clcn1Q64347 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Clcn1Q64347 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Clcn1Q64347 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Clcn1Q64347 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Clcn1Q64347 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Clcn1Q64347 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Clcn1Q64347 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Clcn1Q64347 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Clcn1Q64347 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Clcn1Q64347 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Clcn1Q64347 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Clcn1Q64347 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
Clcn1Q64347 Gm8738-201ENSMUST00000172606 329 ntBASIC16.65■□□□□ 0.26
Clcn1Q64347 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
Clcn1Q64347 Gm28693-202ENSMUST00000190758 331 ntBASIC16.65■□□□□ 0.26
Clcn1Q64347 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC16.65■□□□□ 0.26
Clcn1Q64347 Gm4768-201ENSMUST00000206199 686 ntBASIC16.65■□□□□ 0.26
Clcn1Q64347 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Clcn1Q64347 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Clcn1Q64347 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Clcn1Q64347 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Clcn1Q64347 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Clcn1Q64347 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Clcn1Q64347 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC16.65■□□□□ 0.26
Clcn1Q64347 Gm45251-201ENSMUST00000209486 1465 ntBASIC16.65■□□□□ 0.26
Clcn1Q64347 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Clcn1Q64347 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Clcn1Q64347 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Clcn1Q64347 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Clcn1Q64347 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Clcn1Q64347 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Clcn1Q64347 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Clcn1Q64347 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Clcn1Q64347 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.26
Clcn1Q64347 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Clcn1Q64347 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Clcn1Q64347 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Clcn1Q64347 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Clcn1Q64347 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC16.64■□□□□ 0.25
Clcn1Q64347 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Clcn1Q64347 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC16.64■□□□□ 0.25
Clcn1Q64347 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Clcn1Q64347 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Clcn1Q64347 Gm20482-202ENSMUST00000174729 825 ntBASIC16.64■□□□□ 0.25
Clcn1Q64347 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Clcn1Q64347 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Clcn1Q64347 Gm18515-201ENSMUST00000219755 797 ntBASIC16.64■□□□□ 0.25
Clcn1Q64347 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Clcn1Q64347 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Clcn1Q64347 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Clcn1Q64347 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Clcn1Q64347 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Clcn1Q64347 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Clcn1Q64347 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC16.64■□□□□ 0.25
Clcn1Q64347 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Clcn1Q64347 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Clcn1Q64347 AC117194.1-201ENSMUST00000224847 3002 ntBASIC16.64■□□□□ 0.25
Clcn1Q64347 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Clcn1Q64347 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Clcn1Q64347 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Clcn1Q64347 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Clcn1Q64347 Gm38049-201ENSMUST00000195698 1372 ntBASIC16.64■□□□□ 0.25
Clcn1Q64347 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Clcn1Q64347 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Clcn1Q64347 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Clcn1Q64347 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Clcn1Q64347 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Clcn1Q64347 Gm44443-201ENSMUST00000204396 5633 ntBASIC16.63■□□□□ 0.25
Clcn1Q64347 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Clcn1Q64347 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Clcn1Q64347 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC16.63■□□□□ 0.25
Clcn1Q64347 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Clcn1Q64347 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Clcn1Q64347 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Clcn1Q64347 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Clcn1Q64347 Gm11637-201ENSMUST00000120601 592 ntBASIC16.63■□□□□ 0.25
Clcn1Q64347 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC16.63■□□□□ 0.25
Clcn1Q64347 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Clcn1Q64347 Gm4819-201ENSMUST00000182170 1009 ntBASIC16.63■□□□□ 0.25
Clcn1Q64347 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC16.63■□□□□ 0.25
Clcn1Q64347 Gm21769-201ENSMUST00000211922 111 ntBASIC16.63■□□□□ 0.25
Clcn1Q64347 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Clcn1Q64347 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Clcn1Q64347 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Clcn1Q64347 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Clcn1Q64347 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Clcn1Q64347 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Clcn1Q64347 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC16.63■□□□□ 0.25
Clcn1Q64347 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Clcn1Q64347 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Clcn1Q64347 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Clcn1Q64347 Gm45638-201ENSMUST00000211507 2878 ntBASIC16.63■□□□□ 0.25
Clcn1Q64347 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms