Protein–RNA interactions for Protein: Q62425

Ndufa4, Cytochrome c oxidase subunit NDUFA4, mousemouse

Known RBP Predictions only

Length 82 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndufa4Q62425 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Ndufa4Q62425 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Ndufa4Q62425 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC9.52□□□□□ -0.89
Ndufa4Q62425 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Ndufa4Q62425 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.89
Ndufa4Q62425 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.89
Ndufa4Q62425 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Ndufa4Q62425 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.89
Ndufa4Q62425 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.89
Ndufa4Q62425 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Ndufa4Q62425 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Ndufa4Q62425 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC9.51□□□□□ -0.89
Ndufa4Q62425 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Ndufa4Q62425 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Ndufa4Q62425 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Ndufa4Q62425 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC9.51□□□□□ -0.89
Ndufa4Q62425 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC9.51□□□□□ -0.89
Ndufa4Q62425 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC9.51□□□□□ -0.89
Ndufa4Q62425 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Ndufa4Q62425 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Ndufa4Q62425 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Ndufa4Q62425 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Ndufa4Q62425 Gm37324-201ENSMUST00000194500 4504 ntBASIC9.51□□□□□ -0.89
Ndufa4Q62425 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Ndufa4Q62425 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Ndufa4Q62425 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Ndufa4Q62425 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Ndufa4Q62425 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Ndufa4Q62425 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Ndufa4Q62425 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Ndufa4Q62425 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC9.51□□□□□ -0.89
Ndufa4Q62425 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC9.51□□□□□ -0.89
Ndufa4Q62425 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Ndufa4Q62425 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Ndufa4Q62425 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC9.51□□□□□ -0.89
Ndufa4Q62425 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC9.51□□□□□ -0.89
Ndufa4Q62425 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC9.51□□□□□ -0.89
Ndufa4Q62425 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC9.51□□□□□ -0.89
Ndufa4Q62425 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC9.51□□□□□ -0.89
Ndufa4Q62425 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC9.51□□□□□ -0.89
Ndufa4Q62425 Gm18766-201ENSMUST00000189811 808 ntBASIC9.51□□□□□ -0.89
Ndufa4Q62425 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC9.51□□□□□ -0.89
Ndufa4Q62425 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC9.51□□□□□ -0.89
Ndufa4Q62425 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC9.51□□□□□ -0.89
Ndufa4Q62425 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Ndufa4Q62425 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Ndufa4Q62425 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC9.51□□□□□ -0.89
Ndufa4Q62425 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC9.51□□□□□ -0.89
Ndufa4Q62425 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Ndufa4Q62425 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Ndufa4Q62425 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Ndufa4Q62425 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Ndufa4Q62425 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC9.51□□□□□ -0.89
Ndufa4Q62425 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Ndufa4Q62425 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Ndufa4Q62425 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Ndufa4Q62425 Gm8798-201ENSMUST00000211877 1661 ntBASIC9.51□□□□□ -0.89
Ndufa4Q62425 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Ndufa4Q62425 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC9.51□□□□□ -0.89
Ndufa4Q62425 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Ndufa4Q62425 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Ndufa4Q62425 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Ndufa4Q62425 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Ndufa4Q62425 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Ndufa4Q62425 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Ndufa4Q62425 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC9.51□□□□□ -0.89
Ndufa4Q62425 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC9.5□□□□□ -0.89
Ndufa4Q62425 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Ndufa4Q62425 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC9.5□□□□□ -0.89
Ndufa4Q62425 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC9.5□□□□□ -0.89
Ndufa4Q62425 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC9.5□□□□□ -0.89
Ndufa4Q62425 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Ndufa4Q62425 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC9.5□□□□□ -0.89
Ndufa4Q62425 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC9.5□□□□□ -0.89
Ndufa4Q62425 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Ndufa4Q62425 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Ndufa4Q62425 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Ndufa4Q62425 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Ndufa4Q62425 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC9.5□□□□□ -0.89
Ndufa4Q62425 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Ndufa4Q62425 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Ndufa4Q62425 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Ndufa4Q62425 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC9.5□□□□□ -0.89
Ndufa4Q62425 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Ndufa4Q62425 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Ndufa4Q62425 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Ndufa4Q62425 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC9.5□□□□□ -0.89
Ndufa4Q62425 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC9.5□□□□□ -0.89
Ndufa4Q62425 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Ndufa4Q62425 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC9.5□□□□□ -0.89
Ndufa4Q62425 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Ndufa4Q62425 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC9.5□□□□□ -0.89
Ndufa4Q62425 Gm11745-201ENSMUST00000121669 448 ntBASIC9.5□□□□□ -0.89
Ndufa4Q62425 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC9.5□□□□□ -0.89
Ndufa4Q62425 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC9.5□□□□□ -0.89
Ndufa4Q62425 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Ndufa4Q62425 AC138604.1-201ENSMUST00000226969 739 ntBASIC9.5□□□□□ -0.89
Ndufa4Q62425 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Ndufa4Q62425 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC9.5□□□□□ -0.89
Ndufa4Q62425 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC9.5□□□□□ -0.89
Retrieved 100 of 76,532 protein–RNA pairs in 42.8 ms