Protein–RNA interactions for Protein: Q61982

Notch3, Neurogenic locus notch homolog protein 3, mousemouse

Predictions only

Length 2,318 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Notch3Q61982 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC10.13□□□□□ -0.79
Notch3Q61982 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Notch3Q61982 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC10.13□□□□□ -0.79
Notch3Q61982 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC10.13□□□□□ -0.79
Notch3Q61982 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Notch3Q61982 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC10.12□□□□□ -0.79
Notch3Q61982 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC10.12□□□□□ -0.79
Notch3Q61982 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Notch3Q61982 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC10.12□□□□□ -0.79
Notch3Q61982 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Notch3Q61982 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Notch3Q61982 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Notch3Q61982 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC10.12□□□□□ -0.79
Notch3Q61982 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Notch3Q61982 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Notch3Q61982 Gm4271-201ENSMUST00000174444 973 ntBASIC10.12□□□□□ -0.79
Notch3Q61982 Mir7070-201ENSMUST00000183657 86 ntBASIC10.12□□□□□ -0.79
Notch3Q61982 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC10.12□□□□□ -0.79
Notch3Q61982 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Notch3Q61982 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC10.12□□□□□ -0.79
Notch3Q61982 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC10.12□□□□□ -0.79
Notch3Q61982 Gm43822-201ENSMUST00000200285 476 ntBASIC10.12□□□□□ -0.79
Notch3Q61982 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC10.12□□□□□ -0.79
Notch3Q61982 4933424G06Rik-204ENSMUST00000208994 1120 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Notch3Q61982 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Notch3Q61982 AC155637.1-201ENSMUST00000218560 636 ntBASIC10.12□□□□□ -0.79
Notch3Q61982 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC10.12□□□□□ -0.79
Notch3Q61982 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Notch3Q61982 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Notch3Q61982 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC10.12□□□□□ -0.79
Notch3Q61982 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Notch3Q61982 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Notch3Q61982 Clec16a-201ENSMUST00000038145 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Notch3Q61982 Gm11960-202ENSMUST00000181063 2858 ntBASIC10.12□□□□□ -0.79
Notch3Q61982 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Notch3Q61982 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Notch3Q61982 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Notch3Q61982 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC10.12□□□□□ -0.79
Notch3Q61982 Gm5687-201ENSMUST00000118252 640 ntBASIC10.12□□□□□ -0.79
Notch3Q61982 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC10.12□□□□□ -0.79
Notch3Q61982 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Notch3Q61982 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Notch3Q61982 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC10.12□□□□□ -0.79
Notch3Q61982 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC10.12□□□□□ -0.79
Notch3Q61982 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Notch3Q61982 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Notch3Q61982 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Notch3Q61982 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC10.12□□□□□ -0.79
Notch3Q61982 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Notch3Q61982 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Notch3Q61982 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC10.12□□□□□ -0.79
Notch3Q61982 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Notch3Q61982 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC10.12□□□□□ -0.79
Notch3Q61982 Gm5620-201ENSMUST00000077991 1348 ntBASIC10.12□□□□□ -0.79
Notch3Q61982 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC10.12□□□□□ -0.79
Notch3Q61982 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC10.12□□□□□ -0.79
Notch3Q61982 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Notch3Q61982 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Notch3Q61982 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC10.12□□□□□ -0.79
Notch3Q61982 Ptprm-203ENSMUST00000224091 3773 ntBASIC10.11□□□□□ -0.79
Notch3Q61982 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC10.11□□□□□ -0.79
Notch3Q61982 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Notch3Q61982 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC10.11□□□□□ -0.79
Notch3Q61982 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC10.11□□□□□ -0.79
Notch3Q61982 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC10.11□□□□□ -0.79
Notch3Q61982 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Notch3Q61982 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC10.11□□□□□ -0.79
Notch3Q61982 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Notch3Q61982 Usp22-201ENSMUST00000041683 4434 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Notch3Q61982 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Notch3Q61982 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Notch3Q61982 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Notch3Q61982 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Notch3Q61982 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC10.11□□□□□ -0.79
Notch3Q61982 Gm29199-201ENSMUST00000187766 775 ntBASIC10.11□□□□□ -0.79
Notch3Q61982 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC10.11□□□□□ -0.79
Notch3Q61982 Gm38223-201ENSMUST00000194484 695 ntBASIC10.11□□□□□ -0.79
Notch3Q61982 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Notch3Q61982 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Notch3Q61982 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Notch3Q61982 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Notch3Q61982 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Notch3Q61982 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Notch3Q61982 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Notch3Q61982 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC10.11□□□□□ -0.79
Notch3Q61982 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Notch3Q61982 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC10.11□□□□□ -0.79
Notch3Q61982 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Notch3Q61982 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Notch3Q61982 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Notch3Q61982 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Notch3Q61982 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Notch3Q61982 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC10.11□□□□□ -0.79
Notch3Q61982 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC10.11□□□□□ -0.79
Notch3Q61982 Gm13342-201ENSMUST00000121055 207 ntBASIC10.11□□□□□ -0.79
Notch3Q61982 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC10.11□□□□□ -0.79
Notch3Q61982 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Notch3Q61982 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC10.11□□□□□ -0.79
Notch3Q61982 Gm38341-201ENSMUST00000195357 515 ntBASIC10.11□□□□□ -0.79
Notch3Q61982 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Retrieved 100 of 76,532 protein–RNA pairs in 48 ms