Protein–RNA interactions for Protein: Q61467

Zic4, Zinc finger protein ZIC 4, mousemouse

Predictions only

Length 341 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zic4Q61467 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC10.63□□□□□ -0.71
Zic4Q61467 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Zic4Q61467 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC10.63□□□□□ -0.71
Zic4Q61467 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC10.63□□□□□ -0.71
Zic4Q61467 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Zic4Q61467 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC10.63□□□□□ -0.71
Zic4Q61467 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Zic4Q61467 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Zic4Q61467 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Zic4Q61467 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Zic4Q61467 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Zic4Q61467 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Zic4Q61467 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Zic4Q61467 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Zic4Q61467 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Zic4Q61467 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Zic4Q61467 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Zic4Q61467 Gm43721-201ENSMUST00000199677 2313 ntBASIC10.63□□□□□ -0.71
Zic4Q61467 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Zic4Q61467 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Zic4Q61467 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Zic4Q61467 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC10.63□□□□□ -0.71
Zic4Q61467 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC10.63□□□□□ -0.71
Zic4Q61467 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Zic4Q61467 Gm5780-201ENSMUST00000217774 1834 ntBASIC10.63□□□□□ -0.71
Zic4Q61467 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Zic4Q61467 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Zic4Q61467 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Zic4Q61467 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Zic4Q61467 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Zic4Q61467 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC10.62□□□□□ -0.71
Zic4Q61467 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Zic4Q61467 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Zic4Q61467 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Zic4Q61467 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Zic4Q61467 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Zic4Q61467 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Zic4Q61467 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
Zic4Q61467 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Zic4Q61467 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Zic4Q61467 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Zic4Q61467 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC10.62□□□□□ -0.71
Zic4Q61467 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Zic4Q61467 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC10.62□□□□□ -0.71
Zic4Q61467 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC10.62□□□□□ -0.71
Zic4Q61467 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC10.62□□□□□ -0.71
Zic4Q61467 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC10.62□□□□□ -0.71
Zic4Q61467 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC10.62□□□□□ -0.71
Zic4Q61467 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC10.62□□□□□ -0.71
Zic4Q61467 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Zic4Q61467 Gm18636-201ENSMUST00000218846 1066 ntBASIC10.62□□□□□ -0.71
Zic4Q61467 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Zic4Q61467 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Zic4Q61467 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Zic4Q61467 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Zic4Q61467 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC10.62□□□□□ -0.71
Zic4Q61467 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Zic4Q61467 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC10.62□□□□□ -0.71
Zic4Q61467 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Zic4Q61467 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Zic4Q61467 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
Zic4Q61467 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Zic4Q61467 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC10.62□□□□□ -0.71
Zic4Q61467 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Zic4Q61467 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Zic4Q61467 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Zic4Q61467 Gm7224-201ENSMUST00000121359 2066 ntBASIC10.62□□□□□ -0.71
Zic4Q61467 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Zic4Q61467 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC10.62□□□□□ -0.71
Zic4Q61467 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Zic4Q61467 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Zic4Q61467 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Zic4Q61467 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Zic4Q61467 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Zic4Q61467 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Zic4Q61467 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Zic4Q61467 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Zic4Q61467 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Zic4Q61467 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Zic4Q61467 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Zic4Q61467 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Zic4Q61467 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Zic4Q61467 Gm5053-201ENSMUST00000208361 1678 ntBASIC10.61□□□□□ -0.71
Zic4Q61467 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Zic4Q61467 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
Zic4Q61467 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
Zic4Q61467 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Zic4Q61467 H2af-ps-201ENSMUST00000119066 295 ntBASIC10.61□□□□□ -0.71
Zic4Q61467 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC10.61□□□□□ -0.71
Zic4Q61467 Gm28630-201ENSMUST00000187806 498 ntBASIC10.61□□□□□ -0.71
Zic4Q61467 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC10.61□□□□□ -0.71
Zic4Q61467 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Zic4Q61467 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC10.61□□□□□ -0.71
Zic4Q61467 Gm45683-201ENSMUST00000210825 1247 ntBASIC10.61□□□□□ -0.71
Zic4Q61467 Gm5425-201ENSMUST00000214125 459 ntBASIC10.61□□□□□ -0.71
Zic4Q61467 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC10.61□□□□□ -0.71
Zic4Q61467 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Zic4Q61467 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Zic4Q61467 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Zic4Q61467 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms