Protein–RNA interactions for Protein: Q61466

Smarcd1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1, mousemouse

Known RBP Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd1Q61466 Gm9924-202ENSMUST00000192760 2311 ntBASIC13.69□□□□□ -0.22
Smarcd1Q61466 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Smarcd1Q61466 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Smarcd1Q61466 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Smarcd1Q61466 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Smarcd1Q61466 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Smarcd1Q61466 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Smarcd1Q61466 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Smarcd1Q61466 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Smarcd1Q61466 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Smarcd1Q61466 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Smarcd1Q61466 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Smarcd1Q61466 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Smarcd1Q61466 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Smarcd1Q61466 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Smarcd1Q61466 Gm8706-201ENSMUST00000197372 1491 ntBASIC13.68□□□□□ -0.22
Smarcd1Q61466 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Smarcd1Q61466 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Smarcd1Q61466 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC13.68□□□□□ -0.22
Smarcd1Q61466 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Smarcd1Q61466 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Smarcd1Q61466 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Smarcd1Q61466 Gm23931-201ENSMUST00000103842 109 ntBASIC13.68□□□□□ -0.22
Smarcd1Q61466 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Smarcd1Q61466 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Smarcd1Q61466 Gm17420-201ENSMUST00000164753 153 ntBASIC13.68□□□□□ -0.22
Smarcd1Q61466 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC13.68□□□□□ -0.22
Smarcd1Q61466 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Smarcd1Q61466 Gm37042-201ENSMUST00000193816 581 ntBASIC13.68□□□□□ -0.22
Smarcd1Q61466 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Smarcd1Q61466 Gm43438-201ENSMUST00000198133 379 ntBASIC13.68□□□□□ -0.22
Smarcd1Q61466 Gm19163-201ENSMUST00000223313 780 ntBASIC13.68□□□□□ -0.22
Smarcd1Q61466 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Smarcd1Q61466 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Smarcd1Q61466 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Smarcd1Q61466 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Smarcd1Q61466 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC13.68□□□□□ -0.22
Smarcd1Q61466 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Smarcd1Q61466 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Smarcd1Q61466 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Smarcd1Q61466 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Smarcd1Q61466 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Smarcd1Q61466 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Smarcd1Q61466 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Smarcd1Q61466 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Smarcd1Q61466 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Smarcd1Q61466 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Smarcd1Q61466 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Smarcd1Q61466 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Smarcd1Q61466 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Smarcd1Q61466 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Smarcd1Q61466 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Smarcd1Q61466 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC13.67□□□□□ -0.22
Smarcd1Q61466 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Smarcd1Q61466 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC13.67□□□□□ -0.22
Smarcd1Q61466 Gm44291-201ENSMUST00000203102 2865 ntBASIC13.67□□□□□ -0.22
Smarcd1Q61466 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Smarcd1Q61466 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC13.67□□□□□ -0.22
Smarcd1Q61466 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Smarcd1Q61466 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Smarcd1Q61466 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Smarcd1Q61466 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Smarcd1Q61466 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
Smarcd1Q61466 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC13.67□□□□□ -0.22
Smarcd1Q61466 Gm4768-201ENSMUST00000206199 686 ntBASIC13.67□□□□□ -0.22
Smarcd1Q61466 AC125350.2-201ENSMUST00000224737 727 ntBASIC13.67□□□□□ -0.22
Smarcd1Q61466 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Smarcd1Q61466 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Smarcd1Q61466 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Smarcd1Q61466 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Smarcd1Q61466 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Smarcd1Q61466 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Smarcd1Q61466 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Smarcd1Q61466 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Smarcd1Q61466 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Smarcd1Q61466 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Smarcd1Q61466 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Smarcd1Q61466 AC122314.1-201ENSMUST00000223056 2239 ntBASIC13.67□□□□□ -0.22
Smarcd1Q61466 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Smarcd1Q61466 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Smarcd1Q61466 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Smarcd1Q61466 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Smarcd1Q61466 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Smarcd1Q61466 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Smarcd1Q61466 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Smarcd1Q61466 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Smarcd1Q61466 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Smarcd1Q61466 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Smarcd1Q61466 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC13.66□□□□□ -0.22
Smarcd1Q61466 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Smarcd1Q61466 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Smarcd1Q61466 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Smarcd1Q61466 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC13.66□□□□□ -0.22
Smarcd1Q61466 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Smarcd1Q61466 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Smarcd1Q61466 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Smarcd1Q61466 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Smarcd1Q61466 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Smarcd1Q61466 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Smarcd1Q61466 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 59.3 ms